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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
72051-72100 / 86044 show all
dgrover-gatkSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
90.9091
83.3333
100.0000
88.3721
51500
dgrover-gatkSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.9554
99.9406
99.9703
49.4797
1009661009633
100.0000
dgrover-gatkSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.5765
99.8591
99.2956
64.7620
27639392762919619
9.6939
dgrover-gatkSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.3936
99.8748
98.9170
66.2587
17546221753619215
7.8125
dgrover-gatkSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
83.0986
1211200
dgrover-gatkSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.9009
99.8415
99.9603
61.7282
10081161008144
100.0000
egarrison-hhgaSNPtilowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.3239
99.0379
99.6116
52.2441
276902692769510853
49.0741
egarrison-hhgaSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.2155
98.8292
99.6047
53.9964
17642209176407027
38.5714
egarrison-hhgaSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
92.3077
100.0000
85.7143
81.5789
60611
100.0000
egarrison-hhgaSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.5195
99.4061
99.6332
48.7604
1004260100493725
67.5676
egarrison-hhgaSNP*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.4287
99.1605
99.6983
57.8100
551644675518016788
52.6946
egarrison-hhgaSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.3357
98.9921
99.6817
59.1116
350623573507011248
42.8571
egarrison-hhgaSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.2963
100.0000
92.8571
80.2817
1301311
100.0000
egarrison-hhgaSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.5935
99.4554
99.7320
55.2895
20089110200975439
72.2222
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
80.7692
96.2804
002154
80.0000
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
95.5307
00800
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
80.0000
97.6744
00411
100.0000
eyeh-varpipeINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
69.2308
95.7377
00943
75.0000
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
76.0643
66.6667
88.5463
95.7295
2180410478
75.0000
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
78.6102
66.6667
95.7672
95.4210
21362164
25.0000
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
82.8070
95.5800
002364946
93.8776
eyeh-varpipeINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
84.0816
96.2647
002063928
71.7949
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
97.6760
96.8929
98.4720
68.6413
1509348415080234134
57.2650
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
97.9478
97.9351
97.9605
73.1911
5976126595612448
38.7097
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.4215
95.7225
99.1819
60.8518
568425456984744
93.6170
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
97.6237
97.0597
98.1943
69.6107
343310434266342
66.6667
egarrison-hhgaSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.5328
99.2846
99.7822
62.2610
27480198274916036
60.0000
egarrison-hhgaSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.4577
99.1576
99.7596
63.2532
17420148174304221
50.0000
egarrison-hhgaSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.2963
100.0000
92.8571
80.2817
1301311
100.0000
egarrison-hhgaSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.6677
99.5048
99.8311
60.3522
1004750100481714
82.3529
eyeh-varpipeINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
87.5783
85.5583
89.6959
70.2246
80809136401390871597815625
97.7907
eyeh-varpipeINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
94.9804
93.5841
96.4190
67.2497
4517430977967229592749
92.9030
eyeh-varpipeINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
56.5705
40.1699
95.6035
76.3129
6193922410155467451
96.5739
eyeh-varpipeINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
86.9712
95.7121
79.6933
69.9711
294421319492601255212425
98.9882
egarrison-hhgaINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
94.4732
91.9834
97.1014
61.6929
48884264891146111
76.0274
egarrison-hhgaINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
95.1176
93.9650
96.2988
73.4406
14489314315536
65.4545
egarrison-hhgaINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
94.5419
90.7051
98.7175
44.4016
283029028483734
91.8919
egarrison-hhgaINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
92.6472
93.4150
91.8919
71.8393
610436125441
75.9259
egarrison-hhgaINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
87.5573
82.7344
92.9773
75.9228
9441979407143
60.5634
egarrison-hhgaINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
90.2590
88.0734
92.5558
81.8305
384523733015
50.0000
egarrison-hhgaINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
85.7593
76.8439
97.0149
63.3307
4481354551412
85.7143
egarrison-hhgaINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
85.8238
91.8033
80.5755
80.1994
112101122716
59.2593
egarrison-hhgaINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
100.0000
01000
egarrison-hhgaINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
100.0000
01000
egarrison-hhgaINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
82.4573
73.9961
93.1034
68.3567
26359262673198164
82.8283
egarrison-hhgaINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
90.7286
91.6605
89.8154
74.1565
12421131314149130
87.2483
egarrison-hhgaINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
57.3427
40.2628
99.5902
49.2196
52177348622
100.0000
egarrison-hhgaINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
95.2513
95.6140
94.8913
62.4643
872408734732
68.0851