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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1431 1432 1433 1434 1435 1436 1437 1438 1439 ... 1720 1721 » 71701-71750 / 86044 show all
eyeh-varpipe	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	77.4599	71.6987	84.2278	56.4520	11527	4550	21313	3991	3815	95.5901
eyeh-varpipe	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	92.9543	91.5421	94.4108	58.8410	5877	543	11520	682	569	83.4311
eyeh-varpipe	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	53.7340	37.1777	96.8750	57.0119	2192	3704	3317	107	99	92.5234
eyeh-varpipe	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	77.4574	91.9436	66.9147	52.7787	3458	303	6476	3202	3147	98.2823
eyeh-varpipe	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	55.8126	45.6817	71.7174	42.4460	2888	3434	6598	2602	2576	99.0008
eyeh-varpipe	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	75.7026	69.8630	82.6075	47.3461	1377	594	3073	647	636	98.2998
eyeh-varpipe	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	40.3639	25.5814	95.6173	48.0711	902	2624	1789	82	81	98.7805
eyeh-varpipe	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	58.2480	73.8182	48.1020	32.1234	609	216	1736	1873	1859	99.2525
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	94.3555	90.6219	98.4100	63.4241	41416	4286	41653	673	294	43.6850
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	94.2166	90.2898	98.5006	65.6575	25924	2788	26146	398	31	7.7889
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	88.8889	80.0000	100.0000	79.6610	12	3	12	0	0
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	95.2997	91.1929	99.7939	58.4384	15480	1495	15495	32	23	71.8750
ckim-vqsr	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.0302	97.5303	98.5353	67.8515	63737	1614	63506	944	836	88.5593
ckim-vqsr	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.5995	98.7927	98.4071	74.5792	30112	368	29653	480	385	80.2083
ckim-vqsr	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.1302	92.8764	99.6203	36.5800	15515	1190	15743	60	60	100.0000
ckim-vqsr	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.7459	99.6917	97.8179	67.5313	18110	56	18110	404	391	96.7822
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	89.4795	84.4436	95.1541	60.5296	13576	2501	13588	692	434	62.7168
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	90.1406	89.3302	90.9658	70.1878	5735	685	5689	565	335	59.2920
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	89.7782	82.5984	98.3250	32.1288	4870	1026	4931	84	71	84.5238
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	87.7042	78.9949	98.5719	61.4567	2971	790	2968	43	28	65.1163
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	82.0986	72.9041	93.9468	53.8786	4609	1713	4625	298	190	63.7584
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	81.8319	77.0675	87.2242	66.9862	1519	452	1502	220	128	58.1818
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	81.7466	69.7674	98.6920	34.2284	2460	1066	2490	33	24	72.7273
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	84.0119	76.3636	93.3628	58.1998	630	195	633	45	38	84.4444
ckim-isaac	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	94.1491	90.4125	98.2078	67.8829	13174	1397	13261	242	122	50.4132
ckim-isaac	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	94.0520	90.0033	98.4822	69.9861	8220	913	8305	128	13	10.1562
ckim-isaac	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	88.8889	80.0000	100.0000	79.6610	12	3	12	0	0
ckim-isaac	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	95.2859	91.1304	99.8384	63.0944	4942	481	4944	8	5	62.5000
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	71.7619	59.4118	90.5941	73.3930	909	621	915	95	49	51.5789
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	71.5265	61.2613	85.9244	78.5005	408	258	409	67	27	40.2985
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	68.7152	52.6555	98.8701	55.1331	347	312	350	4	4	100.0000
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	80.4824	75.1220	86.6667	77.3014	154	51	156	24	18	75.0000
ckim-vqsr	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	94.4491	90.7138	98.5051	60.8883	28251	2892	28401	431	172	39.9072
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	94.2933	90.4234	98.5092	63.1853	17704	1875	17841	270	18	6.6667
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	85.7143	75.0000	100.0000	76.9231	9	3	9	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	95.3063	91.2223	99.7730	55.8289	10538	1014	10551	24	18	75.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.3646	97.7617	98.9750	61.5381	30705	703	30705	318	294	92.4528
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	99.0685	99.1132	99.0238	69.1438	13635	122	13593	134	112	83.5821
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.6665	93.9188	99.5798	30.8815	8726	565	8768	37	37	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.0327	99.8086	98.2688	63.7648	8344	16	8344	147	145	98.6395
ckim-vqsr	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.0024	96.5790	99.4683	68.2096	15527	550	15528	83	69	83.1325
ckim-vqsr	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	99.0199	98.6449	99.3978	76.9388	6333	87	6272	38	24	63.1579
ckim-vqsr	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.1530	92.6221	99.9638	35.0611	5461	435	5523	2	2	100.0000
ckim-vqsr	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.0580	99.2555	98.8612	71.4717	3733	28	3733	43	43	100.0000
ckim-vqsr	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het		0.0000	0.0000	0.0000	0	0	0	0	0

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