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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1429 1430 1431 1432 1433 1434 1435 1436 1437 ... 1720 1721 » 71601-71650 / 86044 show all
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	97.4560	96.0456	98.9084	63.8644	6072	250	6071	67	60	89.5522
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.5612	97.7676	99.3678	76.3607	1927	44	1886	12	6	50.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	97.0392	94.3279	99.9110	42.3116	3326	200	3366	3	3	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	96.5802	99.2727	94.0299	72.0565	819	6	819	52	51	98.0769
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.6331	99.2657	98.0084	78.2327	14464	107	14616	297	18	6.0606
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.0870	99.1898	97.0085	80.9382	9059	74	9177	283	13	4.5936
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.9697	100.0000	94.1176	90.5556	15	0	16	1	1	100.0000
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.5758	99.3915	99.7609	70.9351	5390	33	5423	13	4	30.7692
ckim-isaac	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*		0.0000	0.0000	0.0000	0	1	0	0	0
ckim-isaac	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het		0.0000	0.0000	0.0000	0	1	0	0	0
ckim-isaac	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	92.6629	89.7351	95.7882	48.3290	28184	3224	28110	1236	977	79.0453
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	92.5242	92.9345	92.1175	55.9701	12785	972	12446	1065	828	77.7465
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	91.7362	85.8358	98.5078	31.2346	7975	1316	8252	125	116	92.8000
ckim-isaac	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	93.7961	88.8038	99.3832	46.4455	7424	936	7412	46	33	71.7391
ckim-isaac	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	89.8755	85.9451	94.1826	54.7512	56166	9185	55450	3425	2525	73.7226
ckim-isaac	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	89.4545	89.1929	89.7177	61.8267	27186	3294	25967	2976	2168	72.8495
ckim-isaac	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	89.1201	81.4606	98.3693	34.9531	13608	3097	14116	234	204	87.1795
ckim-isaac	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	91.0850	84.6196	98.6202	51.6582	15372	2794	15367	215	153	71.1628
ckim-isaac	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	84.9493	79.0158	91.8463	60.4412	3950	1049	3920	348	245	70.4023
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	80.5397	81.1435	79.9449	69.9648	1476	343	1160	291	202	69.4158
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	85.6169	76.2817	97.5556	48.0669	1473	458	1756	44	37	84.0909
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	88.4682	80.1441	98.7217	59.1894	1001	248	1004	13	6	46.1538
ckim-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.8791	99.2863	98.4753	80.3955	14467	104	14467	224	14	6.2500
ckim-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.4418	99.2664	97.6308	83.1720	9066	67	9066	220	10	4.5455
ckim-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	100.0000	100.0000	100.0000	94.2529	15	0	15	0	0
ckim-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.6208	99.3177	99.9258	72.3505	5386	37	5386	4	4	100.0000
ckim-isaac	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	89.9895	86.0506	94.3064	43.1744	15206	2465	15106	912	765	83.8816
ckim-isaac	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	88.0249	90.0274	86.1096	53.5183	5263	583	4761	768	648	84.3750
ckim-isaac	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	90.5907	83.7697	98.6209	32.2653	6751	1308	7151	100	87	87.0000
ckim-isaac	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	91.1743	84.7584	98.6411	42.0544	3192	574	3194	44	30	68.1818
ckim-isaac	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	97.0337	96.0444	98.0437	49.4938	16972	699	18343	366	341	93.1694
cchapple-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	97.6874	96.9552	98.4307	49.3864	5668	178	14614	233	211	90.5579

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