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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1425 1426 1427 1428 1429 1430 1431 1432 1433 ... 1720 1721 » 71401-71450 / 86044 show all
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	58.9492	55.4636	62.9024	64.8301	17420	13988	17390	10256	9749	95.0566
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	72.2252	97.0052	57.5294	65.0968	13345	412	13375	9874	9432	95.5236
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	0.5382	0.0000	0.0000	50	9241	0	0	0
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	63.0485	48.1459	91.3123	63.3492	4025	4335	4015	382	317	82.9843
ghariani-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	90.5713	98.5668	83.7756	81.6259	45047	655	45212	8756	515	5.8817
ghariani-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	87.0232	98.0670	78.2151	83.4802	28157	555	28299	7882	82	1.0404
ghariani-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	15	0	0	0
ghariani-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	97.2427	99.4993	95.0863	76.1894	16890	85	16913	874	433	49.5423
ghariani-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	63.8421	54.7304	76.5939	75.6642	8799	7278	8770	2680	2299	85.7836
ghariani-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	81.6774	94.4237	71.9631	77.4935	6062	358	6078	2368	2066	87.2466
ghariani-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	0.6615	0.0000	0.0000	39	5857	0	0	0
ghariani-varprowl	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	79.6846	71.7362	89.6138	68.4553	2698	1063	2692	312	233	74.6795
ghariani-varprowl	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	42.9887	39.8223	46.7021	60.4305	7037	10634	7031	8024	7936	98.9033
ghariani-varprowl	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	58.4037	95.8604	41.9946	60.0631	5604	242	5634	7782	7720	99.2033
ghariani-varprowl	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	0.3971	0.0000	0.0000	32	8027	0	0	0
ghariani-varprowl	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	51.7959	37.2013	85.2349	63.2016	1401	2365	1397	242	216	89.2562
ghariani-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	44.8723	35.0206	62.4365	72.5902	2214	4108	2214	1332	1288	96.6967
ghariani-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	71.3996	88.8382	59.6839	72.7955	1751	220	1775	1199	1169	97.4979
ghariani-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	0.6523	0.0000	0.0000	23	3503	0	0	0
ghariani-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	62.9334	53.3333	76.7483	71.4713	440	385	439	133	119	89.4737
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	49.4821	41.3725	61.5460	81.3094	633	897	629	393	384	97.7099
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	69.4883	82.5826	59.9782	80.9276	550	116	550	367	359	97.8202
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	0.7587	0.0000	0.0000	5	654	0	0	0
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	50.5393	38.0488	75.2381	84.0909	78	127	79	26	25	96.1538
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	92.5410	98.7028	87.1034	79.6250	30739	404	30832	4565	319	6.9880
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	89.7626	98.2992	82.5903	81.8415	19246	333	19322	4073	56	1.3749
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	12	0	0	0
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	97.6620	99.4893	95.9007	73.2635	11493	59	11510	492	263	53.4553
hfeng-pmm1	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	97.9439	96.7636	99.1534	64.2879	63236	2115	63011	538	416	77.3234
hfeng-pmm1	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	97.7091	96.6601	98.7812	70.7632	29462	1018	29015	358	247	68.9944
hfeng-pmm1	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.9479	94.1155	99.9561	40.9419	15722	983	15944	7	6	85.7143
hfeng-pmm1	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.2113	99.3725	99.0508	63.8916	18052	114	18052	173	163	94.2197
hfeng-pmm1	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*		0.0000	0.0000	0.0000	0	1	0	0	0
hfeng-pmm1	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het		0.0000	0.0000	0.0000	0	1	0	0	0
hfeng-pmm1	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
hfeng-pmm1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.1330	96.7301	99.5772	56.3405	30381	1027	30382	129	103	79.8450
hfeng-pmm1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.0379	96.6562	99.4597	63.5583	13297	460	13254	72	47	65.2778
hfeng-pmm1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	97.0416	94.2633	99.9886	32.8733	8758	533	8802	1	0	0.0000
hfeng-pmm1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.4624	99.5933	99.3319	58.5091	8326	34	8326	56	56	100.0000
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	97.3881	95.8010	99.0287	53.0662	16929	742	16924	166	154	92.7711
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	96.7098	95.5696	97.8776	67.1394	5587	259	5534	120	110	91.6667

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