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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1385 1386 1387 1388 1389 1390 1391 1392 1393 ... 1720 1721 » 69401-69450 / 86044 show all
cchapple-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.1305	99.0001	99.2612	79.9407	10693	108	10748	80	26	32.5000
cchapple-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	98.8536	98.8377	98.8695	82.8620	6803	80	6909	79	25	31.6456
cchapple-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	3	0	0	0	0
cchapple-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.6282	99.2848	99.9740	70.9201	3887	28	3839	1	1	100.0000
cchapple-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	97.0372	96.1312	97.9605	45.4439	14213	572	15466	322	303	94.0994
cchapple-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	97.8606	97.3459	98.3807	45.3197	4328	118	12333	203	185	91.1330
cchapple-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	0.0000	93.8389	0.0000	0.0000	6732	442	0	0	0
cchapple-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	97.9533	99.6209	96.3407	45.9172	3153	12	3133	119	118	99.1597
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.3007	99.0279	99.5750	78.5377	10696	105	10777	46	21	45.6522
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	99.3107	99.0992	99.5231	80.1218	6821	62	6887	33	15	45.4545
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	92.8571	3	0	3	0	0
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.2827	98.9017	99.6667	74.9583	3872	43	3887	13	6	46.1538
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.2554	98.9184	99.5947	75.9330	6585	72	6635	27	13	48.1481
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	99.2575	99.0562	99.4596	77.8403	4198	40	4233	23	9	39.1304
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	92.5926	2	0	2	0	0
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.2515	98.6760	99.8336	71.5436	2385	32	2400	4	4	100.0000
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	99.3735	99.2041	99.5436	81.7204	4113	33	4144	19	8	42.1053
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	99.3959	99.1682	99.6246	82.9296	2623	22	2654	10	6	60.0000
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	92.8571	3	0	3	0	0
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	99.3320	99.2657	99.3984	79.0065	1487	11	1487	9	2	22.2222
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	97.0046	95.1501	98.9328	56.4186	3708	189	3708	40	39	97.5000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	98.6521	97.7707	99.5495	74.2085	921	21	884	4	3	75.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.6831	93.6838	99.8808	36.3590	2477	167	2514	3	3	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	94.8012	99.6785	90.3790	71.4642	310	1	310	33	33	100.0000
ckim-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	97.6448	97.1963	98.0976	61.8032	42120	1215	41922	813	755	92.8659
ckim-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	98.3348	98.9955	97.6830	71.3901	17640	179	17243	409	359	87.7751
ckim-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.0921	92.8093	99.6158	30.7146	13023	1009	13222	51	51	100.0000
ckim-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.3687	99.7649	97.0110	61.9339	11457	27	11457	353	345	97.7337
ckim-dragen	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	96.3339	96.4347	96.2334	71.2425	3922	145	3909	153	129	84.3137
ckim-dragen	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	96.9677	98.5714	95.4152	84.7413	1311	19	1103	53	36	67.9245
ckim-dragen	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	95.9473	92.9048	99.1959	36.3902	1532	117	1727	14	14	100.0000
ckim-dragen	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	95.7834	99.1728	92.6180	69.4386	1079	9	1079	86	79	91.8605
ckim-dragen	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	96.8266	95.4876	98.2036	81.6484	656	31	656	12	10	83.3333
ckim-dragen	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	97.9094	96.7480	99.0991	88.2228	238	8	220	2	0	0.0000
ckim-dragen	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.6296	93.9474	99.4695	63.7151	357	23	375	2	2	100.0000
ckim-dragen	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	93.8462	100.0000	88.4058	90.3631	61	0	61	8	8	100.0000
ckim-dragen	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	0.0000	0.0000	62.5000	82.2222	0	0	5	3	3	100.0000
ckim-dragen	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0

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