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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1375 1376 1377 1378 1379 1380 1381 1382 1383 ... 1720 1721 » 68901-68950 / 86044 show all
gduggal-bwafb	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	95.1505	98.5769	91.9543	85.8273	4087	59	4103	359	47	13.0919
gduggal-bwafb	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	93.1834	98.7146	88.2392	86.6487	2611	34	2626	350	41	11.7143
gduggal-bwafb	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	96.1039	3	0	3	0	0
gduggal-bwafb	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.8593	98.3311	99.3931	83.7319	1473	25	1474	9	6	66.6667
gduggal-bwafb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	43.4690	29.6943	81.0811	66.1792	204	483	150	35	34	97.1429
gduggal-bwafb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	31.6497	19.5122	83.7398	62.9518	48	198	103	20	20	100.0000
gduggal-bwafb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	47.7273	35.0000	75.0000	70.9091	133	247	24	8	8	100.0000
gduggal-bwafb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	50.5495	37.7049	76.6667	71.4286	23	38	23	7	6	85.7143
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	94.2189	98.4978	90.2963	84.2175	6557	100	6216	668	71	10.6287
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	92.5121	98.4899	87.2184	86.1606	4174	64	3910	573	37	6.4572
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	94.4444	100.0000	89.4737	92.8972	2	0	34	4	3	75.0000
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	97.3154	98.5106	96.1490	77.8952	2381	36	2272	91	31	34.0659
gduggal-bwafb	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwafb	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwafb	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwafb	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*		0.0000	0.0000	98.6486	0	0	0	3	0	0.0000
gduggal-bwafb	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het		0.0000	0.0000	99.0654	0	0	0	1	0	0.0000
gduggal-bwafb	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt		0.0000	0.0000	98.9011	0	0	0	1	0	0.0000
gduggal-bwafb	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt		0.0000	0.0000	95.8333	0	0	0	1	0	0.0000
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	82.5353	76.8626	89.1121	55.4494	3126	941	3282	401	398	99.2519
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	81.5250	73.7594	91.1183	51.9309	981	349	2257	220	217	98.6364
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	87.0389	78.1079	98.2759	48.3680	1288	361	171	3	3	100.0000
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	80.7110	78.7684	82.7519	62.8376	857	231	854	178	178	100.0000
gduggal-bwafb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	91.7140	88.5981	95.0570	53.8425	38394	4941	44230	2300	2147	93.3478
gduggal-bwafb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	92.7218	88.4618	97.4128	51.1450	15763	2056	30197	802	660	82.2943
gduggal-bwafb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	89.5071	83.4165	96.5571	49.6329	11705	2327	3113	111	109	98.1982
gduggal-bwafb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	91.8238	95.1411	88.7300	60.2423	10926	558	10920	1387	1378	99.3511
eyeh-varpipe	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	93.7133	98.5372	89.3396	84.5796	10643	158	9822	1172	111	9.4710
eyeh-varpipe	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	91.7238	98.6053	85.7401	86.4136	6787	96	6163	1025	59	5.7561
eyeh-varpipe	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	97.7778	100.0000	95.6522	89.5810	3	0	88	4	3	75.0000
eyeh-varpipe	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	97.2698	98.4163	96.1497	78.7844	3853	62	3571	143	49	34.2657
eyeh-varpipe	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	92.6744	98.6011	87.4197	85.5642	4088	58	3676	529	43	8.1285
eyeh-varpipe	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	90.0673	98.7902	82.7599	87.1462	2613	32	2285	476	24	5.0420
eyeh-varpipe	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	86.9478	3	0	65	0	0
eyeh-varpipe	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	97.1991	98.2644	96.1566	80.7160	1472	26	1326	53	19	35.8491
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*		0.0000	0.0000	0.0000	0	687	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het		0.0000	0.0000	0.0000	0	246	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	380	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	61	0	0	0
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	66.8635	56.6333	81.6046	52.1656	2207	1690	1424	321	304	94.7040
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	66.6828	57.1125	80.1061	51.0601	538	404	906	225	212	94.2222
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	69.8922	57.3374	89.4866	50.3641	1516	1128	366	43	39	90.6977
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	59.1477	49.1961	74.1463	60.0390	153	158	152	53	53	100.0000
gduggal-snapfb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	78.7504	71.1059	88.2367	41.6720	10513	4272	11334	1511	1493	98.8087
gduggal-snapfb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	78.4796	67.4314	93.8575	34.5759	2998	1448	8022	525	510	97.1429

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