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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1359 1360 1361 1362 1363 1364 1365 1366 1367 ... 1720 1721 » 68101-68150 / 86044 show all
dgrover-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.9263	98.3656	99.4933	72.9052	30634	509	30634	156	20	12.8205
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.9555	98.7078	99.2044	76.2044	19326	253	19326	155	19	12.2581
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	100.0000	100.0000	100.0000	92.7273	12	0	12	0	0
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.8752	97.7839	99.9911	64.2557	11296	256	11296	1	1	100.0000
ckim-vqsr	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.0024	96.5790	99.4683	68.2096	15527	550	15528	83	69	83.1325
ckim-vqsr	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	99.0199	98.6449	99.3978	76.9388	6333	87	6272	38	24	63.1579
ckim-vqsr	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.1530	92.6221	99.9638	35.0611	5461	435	5523	2	2	100.0000
ckim-vqsr	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.0580	99.2555	98.8612	71.4717	3733	28	3733	43	43	100.0000
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.3373	95.6976	99.0342	63.1411	6050	272	6050	59	49	83.0508
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.5099	97.8184	99.2114	76.2576	1928	43	1887	15	6	40.0000
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.6029	93.5337	99.8803	39.4384	3298	228	3339	4	4	100.0000
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	97.5725	99.8788	95.3704	71.6070	824	1	824	40	39	97.5000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	96.5454	94.9673	98.1769	85.0222	1453	77	1454	27	18	66.6667
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	96.6974	95.4955	97.9299	88.5024	636	30	615	13	5	38.4615
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.3190	93.1715	99.6865	67.9236	614	45	636	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	96.6667	99.0244	94.4186	91.1777	203	2	203	12	11	91.6667
ckim-vqsr	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*		0.0000	0.0000	0.0000	0	1	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het		0.0000	0.0000	0.0000	0	1	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.2658	97.2995	97.2323	75.7006	4864	135	4848	138	105	76.0870
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	96.5189	98.9555	94.1994	86.2906	1800	19	1559	96	69	71.8750
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.7195	94.2517	99.3201	38.1124	1820	111	2045	14	14	100.0000
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.6910	99.5997	97.7987	75.1563	1244	5	1244	28	22	78.5714
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.3646	97.7617	98.9750	61.5381	30705	703	30705	318	294	92.4528
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	99.0685	99.1132	99.0238	69.1438	13635	122	13593	134	112	83.5821
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.6665	93.9188	99.5798	30.8815	8726	565	8768	37	37	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.0327	99.8086	98.2688	63.7648	8344	16	8344	147	145	98.6395
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.4920	97.0234	97.9652	58.1135	17145	526	17140	356	338	94.9438
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	97.8690	98.8710	96.8872	72.0428	5780	66	5727	184	169	91.8478
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.8550	94.3417	99.5058	29.2966	7603	456	7651	38	38	100.0000
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.1989	99.8938	96.5606	60.0492	3762	4	3762	134	131	97.7612
ckim-vqsr	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.1535	96.7800	97.5299	57.5288	17102	569	17097	433	414	95.6120
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	97.7706	98.9737	96.5965	71.2228	5786	60	5733	202	187	92.5743
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.5254	93.7213	99.5026	29.5295	7553	506	7601	38	37	97.3684
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	97.4618	99.9203	95.1213	59.6779	3763	3	3763	193	190	98.4456
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.1887	96.0131	98.3936	84.9441	1469	61	1470	24	17	70.8333
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	97.5508	96.6967	98.4202	87.9726	644	22	623	10	5	50.0000
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.8850	94.2337	99.6899	70.3721	621	38	643	2	2	100.0000
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	96.9121	99.5122	94.4444	91.3008	204	1	204	12	10	83.3333
bgallagher-sentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.2099	97.0828	99.3634	67.3172	15608	469	15609	100	84	84.0000
bgallagher-sentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	99.0359	98.7072	99.3669	75.4765	6337	83	6278	40	26	65.0000

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