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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1358 1359 1360 1361 1362 1363 1364 1365 1366 ... 1720 1721 » 68051-68100 / 86044 show all
eyeh-varpipe	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	53.7340	37.1777	96.8750	57.0119	2192	3704	3317	107	99	92.5234
eyeh-varpipe	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	77.4574	91.9436	66.9147	52.7787	3458	303	6476	3202	3147	98.2823
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	0.0000	0.0000	61.8280	95.2210	0	0	115	71	46	64.7887
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	0.0000	0.0000	82.9268	96.4777	0	0	34	7	4	57.1429
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	0.0000	75.0000	95.3168	0	0	51	17	13	76.4706
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	0.0000	0.0000	38.9610	93.9655	0	0	30	47	29	61.7021
eyeh-varpipe	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	49.9555	43.2887	59.0497	58.0143	2164	2835	2150	1491	1450	97.2502
eyeh-varpipe	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	64.1207	64.2111	64.0306	63.4499	1168	651	1004	564	554	98.2270
eyeh-varpipe	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	28.2195	16.6235	93.3071	68.0905	321	1610	474	34	33	97.0588
eyeh-varpipe	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	47.8556	54.0432	42.9393	43.9068	675	574	672	893	863	96.6405
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	28.4209	18.3007	63.5810	52.0444	280	1250	522	299	297	99.3311
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	31.0297	20.4204	64.5833	56.8123	136	530	217	119	119	100.0000
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	16.5137	9.1047	88.6667	60.4222	60	599	133	17	17	100.0000
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	45.5773	40.9756	51.3433	39.6396	84	121	172	163	161	98.7730
eyeh-varpipe	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	0.0000	0.0000	69.0773	96.1442	0	1	277	124	70	56.4516
eyeh-varpipe	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	0.0000	0.0000	78.3217	96.5283	0	1	112	31	4	12.9032
eyeh-varpipe	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	0.0000	70.6250	95.1427	0	0	113	47	42	89.3617
eyeh-varpipe	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	0.0000	0.0000	53.0612	96.7191	0	0	52	46	24	52.1739
eyeh-varpipe	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	55.8126	45.6817	71.7174	42.4460	2888	3434	6598	2602	2576	99.0008
eyeh-varpipe	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	75.7026	69.8630	82.6075	47.3461	1377	594	3073	647	636	98.2998
eyeh-varpipe	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	40.3639	25.5814	95.6173	48.0711	902	2624	1789	82	81	98.7805
eyeh-varpipe	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	58.2480	73.8182	48.1020	32.1234	609	216	1736	1873	1859	99.2525
eyeh-varpipe	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	66.0309	61.2472	71.6250	49.8874	10823	6848	10834	4292	4156	96.8313
eyeh-varpipe	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	88.2450	85.0667	91.6700	56.4134	4973	873	4523	411	383	93.1873
eyeh-varpipe	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	45.2414	29.6315	95.6081	53.7572	2388	5671	2830	130	123	94.6154
eyeh-varpipe	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	63.1837	91.9278	48.1333	41.9722	3462	304	3481	3751	3650	97.3074
dgrover-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.2689	97.4195	97.1188	75.1529	4870	129	4854	144	103	71.5278
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	96.4629	98.9555	94.0928	85.7865	1800	19	1561	98	66	67.3469
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.9108	94.6142	99.3217	39.0251	1827	104	2050	14	14	100.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.4945	99.5196	97.4902	74.7924	1243	6	1243	32	23	71.8750
dgrover-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*		0.0000	0.0000	0.0000	0	1	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het		0.0000	0.0000	0.0000	0	1	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.9367	98.4377	99.4408	75.9589	44988	714	44988	253	34	13.4387
ckim-vqsr	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.9180	98.7044	99.1325	79.1132	28340	372	28340	248	29	11.6935
ckim-vqsr	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	100.0000	100.0000	100.0000	94.2529	15	0	15	0	0
ckim-vqsr	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.9677	97.9853	99.9699	67.4084	16633	342	16633	5	5	100.0000
ckim-vqsr	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.9598	98.5931	99.3293	80.6409	14366	205	14366	97	14	14.4330
ckim-vqsr	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.8377	98.6970	98.9788	83.4427	9014	119	9014	93	10	10.7527
ckim-vqsr	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	100.0000	100.0000	100.0000	94.2529	15	0	15	0	0
ckim-vqsr	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.1639	98.4142	99.9251	72.5328	5337	86	5337	4	4	100.0000
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.3188	98.0964	98.5422	67.5554	64107	1244	63878	945	830	87.8307
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.6759	98.9370	98.4161	73.8431	30156	324	29701	478	383	80.1255
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	97.1310	94.7620	99.6215	40.8094	15830	875	16056	61	59	96.7213
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.7709	99.7523	97.8086	67.6045	18121	45	18121	406	388	95.5665

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