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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1355 1356 1357 1358 1359 1360 1361 1362 1363 ... 1720 1721 » 67901-67950 / 86044 show all
jli-custom	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.4217	95.9190	98.9723	59.1578	6064	258	6067	63	48	76.1905
jli-custom	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	97.4424	96.0934	98.8298	71.9151	1894	77	1858	22	8	36.3636
jli-custom	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	97.3256	94.9234	99.8525	39.2800	3347	179	3385	5	5	100.0000
jli-custom	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	97.7460	99.7576	95.8140	68.5212	823	2	824	36	35	97.2222
jli-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.7392	98.1151	99.3713	57.1912	30816	592	30820	195	176	90.2564
jli-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	99.1054	98.7352	99.4784	63.8767	13583	174	13541	71	56	78.8732
jli-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	97.5589	95.6625	99.5320	31.5275	8888	403	8932	42	40	95.2381
jli-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.4223	99.8206	99.0272	61.0885	8345	15	8347	82	80	97.5610
jli-custom	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.5168	96.7193	98.3276	70.0415	4835	164	4821	82	63	76.8293
jli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	96.6502	96.4816	96.8193	81.9352	1755	64	1522	50	37	74.0000
jli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	97.3685	95.4428	99.3735	36.0555	1843	88	2062	13	13	100.0000
jli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.7625	99.0392	98.4873	71.5773	1237	12	1237	19	13	68.4211
jli-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.1965	97.0144	99.4078	64.7466	15597	480	15611	93	72	77.4194
jli-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.5394	97.9595	99.1262	72.9162	6289	131	6239	55	36	65.4545
jli-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	97.1401	94.4708	99.9645	35.6743	5570	326	5631	2	2	100.0000
jli-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.2174	99.3885	99.0469	69.9044	3738	23	3741	36	34	94.4444
ckim-vqsr	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.0302	97.5303	98.5353	67.8515	63737	1614	63506	944	836	88.5593
ckim-vqsr	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.5995	98.7927	98.4071	74.5792	30112	368	29653	480	385	80.2083
ckim-vqsr	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.1302	92.8764	99.6203	36.5800	15515	1190	15743	60	60	100.0000
ckim-vqsr	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.7459	99.6917	97.8179	67.5313	18110	56	18110	404	391	96.7822
ckim-vqsr	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	94.1491	90.4125	98.2078	67.8829	13174	1397	13261	242	122	50.4132
ckim-isaac	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	94.0520	90.0033	98.4822	69.9861	8220	913	8305	128	13	10.1562
ckim-isaac	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	88.8889	80.0000	100.0000	79.6610	12	3	12	0	0
ckim-isaac	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	95.2859	91.1304	99.8384	63.0944	4942	481	4944	8	5	62.5000
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	71.7619	59.4118	90.5941	73.3930	909	621	915	95	49	51.5789
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	71.5265	61.2613	85.9244	78.5005	408	258	409	67	27	40.2985
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	68.7152	52.6555	98.8701	55.1331	347	312	350	4	4	100.0000
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	80.4824	75.1220	86.6667	77.3014	154	51	156	24	18	75.0000
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	82.0986	72.9041	93.9468	53.8786	4609	1713	4625	298	190	63.7584
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	81.8319	77.0675	87.2242	66.9862	1519	452	1502	220	128	58.1818
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	81.7466	69.7674	98.6920	34.2284	2460	1066	2490	33	24	72.7273
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	84.0119	76.3636	93.3628	58.1998	630	195	633	45	38	84.4444
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	94.3555	90.6219	98.4100	63.4241	41416	4286	41653	673	294	43.6850
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	94.2166	90.2898	98.5006	65.6575	25924	2788	26146	398	31	7.7889
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	88.8889	80.0000	100.0000	79.6610	12	3	12	0	0
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	95.2997	91.1929	99.7939	58.4384	15480	1495	15495	32	23	71.8750
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	94.4491	90.7138	98.5051	60.8883	28251	2892	28401	431	172	39.9072
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	94.2933	90.4234	98.5092	63.1853	17704	1875	17841	270	18	6.6667
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	85.7143	75.0000	100.0000	76.9231	9	3	9	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	95.3063	91.2223	99.7730	55.8289	10538	1014	10551	24	18	75.0000
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	89.4795	84.4436	95.1541	60.5296	13576	2501	13588	692	434	62.7168
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	90.1406	89.3302	90.9658	70.1878	5735	685	5689	565	335	59.2920

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