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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1337 1338 1339 1340 1341 1342 1343 1344 1345 ... 1720 1721 » 67001-67050 / 86044 show all
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	0.0000	0.1307	0.0000	0.0000	2	1528	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	0.0000	0.3003	0.0000	0.0000	2	664	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	659	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000	0.0000	0.0000	0	205	0	0	0
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	78.1128	65.0730	97.6884	78.4680	3253	1746	3254	77	59	76.6234
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	69.0451	54.2606	94.9038	89.2027	987	832	987	53	38	71.6981
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	80.2465	67.4262	99.0868	50.5085	1302	629	1302	12	11	91.6667
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	86.6522	77.1817	98.7718	69.3057	964	285	965	12	10	83.3333
gduggal-bwaplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	80.8254	69.6160	96.3373	74.6865	21865	9543	21857	831	448	53.9110
gduggal-bwaplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	77.6657	65.6975	94.9658	82.9333	9038	4719	9036	479	120	25.0522
gduggal-bwaplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	83.3771	73.0169	97.1633	50.4684	6784	2507	6782	198	196	98.9899
gduggal-bwaplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	83.0248	72.2847	97.5133	68.6969	6043	2317	6039	154	132	85.7143
gduggal-bwaplat	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	81.4087	70.0526	97.1590	70.4588	12379	5292	12380	362	254	70.1657
gduggal-bwaplat	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	76.5888	63.9069	95.5499	83.7077	3736	2110	3736	174	72	41.3793
gduggal-bwaplat	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	82.6140	71.5225	97.7770	46.1187	5764	2295	5762	131	129	98.4733
gduggal-bwaplat	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	85.9154	76.4472	98.0606	64.1454	2879	887	2882	57	53	92.9825
gduggal-bwaplat	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	54.1881	37.8431	95.3871	85.0345	579	951	579	28	21	75.0000
gduggal-bwaplat	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	38.9486	24.4745	95.3216	91.4756	163	503	163	8	2	25.0000
gduggal-bwaplat	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	65.5889	49.3171	97.8852	70.8627	325	334	324	7	7	100.0000
gduggal-bwaplat	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	58.9266	44.3902	87.6190	88.5120	91	114	92	13	12	92.3077
gduggal-bwaplat	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	77.5469	65.0258	96.0400	78.6649	42495	22856	42490	1752	879	50.1712
gduggal-bwaplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	73.3800	60.1280	94.1249	85.4676	18327	12153	18328	1144	321	28.0594
gduggal-bwaplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	81.0947	69.5121	97.3091	55.1710	11612	5093	11608	321	314	97.8193
gduggal-bwaplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	80.9828	69.1181	97.7650	72.5426	12556	5610	12554	287	244	85.0174
gduggal-bwaplat	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*		0.0000		100.0000	0	1	0	0	0
gduggal-bwaplat	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het		0.0000		100.0000	0	1	0	0	0
gduggal-bwaplat	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	99.0661	99.2298	98.9030	75.7127	45350	352	45350	503	38	7.5547
ckim-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.7785	99.2790	98.2829	78.8740	28505	207	28505	498	33	6.6265
ckim-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	100.0000	100.0000	100.0000	94.2529	15	0	15	0	0
ckim-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.5563	99.1458	99.9703	67.1493	16830	145	16830	5	5	100.0000
ckim-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	99.1543	99.2037	99.1050	72.6597	30895	248	30895	279	24	8.6022
ckim-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.9363	99.2849	98.5900	75.9853	19439	140	19439	278	23	8.2734
ckim-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	100.0000	100.0000	100.0000	92.7273	12	0	12	0	0
ckim-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.5260	99.0651	99.9913	63.9562	11444	108	11444	1	1	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.3551	95.7767	98.9864	63.1106	6055	267	6055	62	49	79.0323
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.5365	98.0213	99.0571	76.1911	1932	39	1891	18	6	33.3333
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.6181	93.5621	99.8804	39.4313	3299	227	3340	4	4	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	97.5725	99.8788	95.3704	71.6070	824	1	824	40	39	97.5000
ckim-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.1889	97.3395	97.0388	75.6563	4866	133	4850	148	106	71.6216
ckim-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	96.2770	99.0654	93.6413	86.2049	1802	17	1561	106	70	66.0377

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