PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1262 1263 1264 1265 1266 1267 1268 1269 1270 ... 1720 1721 » 63251-63300 / 86044 show all
gduggal-snapfb	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	4	0	0	0
gduggal-snapfb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapfb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapfb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapfb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	82.7586	70.5882	100.0000	99.6599	12	5	12	0	0
gduggal-snapfb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	94.7368	90.0000	100.0000	99.5183	9	1	10	0	0
gduggal-snapfb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		33.3333		100.0000	1	2	0	0	0
gduggal-snapfb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	66.6667	50.0000	100.0000	99.8539	2	2	2	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-bwavard	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwavard	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	77.7778	70.0000	87.5000	99.6063	7	3	7	1	1	100.0000
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	85.7143	85.7143	85.7143	99.5760	6	1	6	1	1	100.0000
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	66.6667	50.0000	100.0000	99.7375	1	1	1	0	0
ghariani-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge