PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
5651-5700 / 86044 show all
gduggal-snapvardSNP*map_sirenhetalt
0.0000
1.2346
0.0000
0.0000
180000
gduggal-snapvardSNP*map_sirenhomalt
98.0593
96.3449
99.8358
52.8740
531402016522958667
77.9070
ghariani-varprowlINDEL*map_sirenhetalt
0.0000
0.8097
0.0000
0.0000
2245000
ghariani-varprowlINDEL*map_sirenhomalt
94.2088
91.6008
96.9697
74.6820
243222324327625
32.8947
ghariani-varprowlINDELC16_PLUSmap_siren*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_sirenhet
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_sirenhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC16_PLUSmap_sirenhomalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5map_siren*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5map_sirenhet
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5map_sirenhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC1_5map_sirenhomalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15map_siren*
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15map_sirenhet
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15map_sirenhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELC6_15map_sirenhomalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtvmap_siren*
95.8840
96.8735
94.9146
68.0322
444941436442712372211
8.8955
gduggal-snapvardSNPtvmap_sirenhet
94.6657
97.2841
92.1846
72.3745
27832777277192350198
8.4255
gduggal-snapvardSNPtvmap_sirenhetalt
0.0000
1.2346
0.0000
0.0000
180000
gduggal-snapvardSNPtvmap_sirenhomalt
98.2279
96.6415
99.8673
55.2791
16661579165522213
59.0909
ghariani-varprowlINDEL*map_siren*
90.8910
92.7126
89.1397
90.4253
68705406870837449
53.6440
ghariani-varprowlINDEL*map_sirenhet
91.4200
98.4028
85.3626
87.1990
4436724438761424
55.7162
gduggal-snapvardINDELI6_15map_siren*
59.5493
55.7377
63.9205
78.6148
17013522512795
74.8031
gduggal-snapvardINDELI6_15map_sirenhet
70.4297
84.6154
60.3175
79.3713
1212219012593
74.4000
gduggal-snapvardINDELI6_15map_sirenhetalt
0.0000
29.1667
0.0000
0.0000
2151000
gduggal-snapvardINDELI6_15map_sirenhomalt
46.8227
31.1111
94.5946
68.9076
28623522
100.0000
gduggal-snapvardSNPtimap_siren*
96.3076
96.1556
96.4600
63.8276
964973858955343506409
11.6657
gduggal-snapvardSNPtimap_sirenhet
95.3627
96.2088
94.5314
68.3335
600172365594993442355
10.3138
gduggal-snapvardSNPtimap_sirenhetalt
0.0000
1.7544
0.0000
0.0000
156000
gduggal-snapvardSNPtimap_sirenhomalt
97.9831
96.2100
99.8227
51.8924
364791437360356454
84.3750
gduggal-snapplatINDEL*map_siren*
79.6077
71.8219
89.2868
89.6136
53222088570968578
11.3869
gduggal-snapplatINDEL*map_sirenhet
79.1743
73.0923
86.3603
90.4763
32951213355256154
9.6257
gduggal-snapplatINDEL*map_sirenhetalt
28.1292
17.4089
73.2143
97.8495
4320441158
53.3333
gduggal-snapplatINDEL*map_sirenhomalt
83.6919
74.7269
95.1011
85.8909
1984671211610916
14.6789
gduggal-snapplatINDELC6_15map_siren*
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15map_sirenhet
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15map_sirenhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15map_sirenhomalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELD16_PLUSmap_siren*
0.0000
0.0000
0.0000
0143000
gduggal-snapplatINDELD16_PLUSmap_sirenhet
0.0000
0.0000
0.0000
078000
gduggal-snapplatINDELD16_PLUSmap_sirenhetalt
0.0000
0.0000
0.0000
031000
gduggal-snapplatINDELD16_PLUSmap_sirenhomalt
0.0000
0.0000
0.0000
034000
gduggal-snapplatINDELD1_5map_siren*
85.8913
80.9294
91.5013
89.0859
2856673327330456
18.4211
gduggal-snapplatINDELD1_5map_sirenhet
85.7607
82.4769
89.3168
89.6940
1878399215725842
16.2791
gduggal-snapplatINDELD1_5map_sirenhetalt
34.1880
23.8095
60.6061
98.0287
206420137
53.8462
gduggal-snapplatINDELD1_5map_sirenhomalt
88.9159
82.0205
97.0771
85.2746
9582101096337
21.2121
gduggal-snapplatINDELD6_15map_siren*
43.1110
29.0766
83.3333
91.7593
148361105213
14.2857
gduggal-snapplatINDELD6_15map_sirenhet
45.1091
32.1429
75.6098
90.5093
9019062202
10.0000
gduggal-snapplatINDELD6_15map_sirenhetalt
21.6216
12.1212
100.0000
96.0265
12871200
gduggal-snapplatINDELD6_15map_sirenhomalt
51.8357
35.3846
96.8750
91.1846
46843111
100.0000