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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1104 1105 1106 1107 1108 1109 1110 1111 1112 ... 1720 1721 » 55351-55400 / 86044 show all
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
ckim-isaac	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	90.7251	83.8065	98.8889	77.1767	797	154	801	9	7	77.7778
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	82.6787	79.0895	86.6092	82.6495	1025	271	1106	171	82	47.9532
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	81.5043	75.5582	88.4663	84.8513	643	208	721	94	7	7.4468
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
ckim-isaac	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	91.7019	85.8108	98.4615	77.2063	381	63	384	6	5	83.3333
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	89.9396	84.3248	96.3555	40.6305	5826	1083	5843	221	166	75.1131
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	90.9226	92.4365	89.4575	60.7169	1491	122	1451	171	123	71.9298
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	91.2250	84.5061	99.1045	23.0475	3927	720	3984	36	30	83.3333
ckim-isaac	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	76.1905	62.8659	96.6825	50.9872	408	241	408	14	13	92.8571
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	98.1224	97.5578	98.6935	48.6222	20093	503	20094	266	260	97.7444
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	98.8289	99.1468	98.5131	59.7388	7321	63	7288	110	106	96.3636
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	97.0680	94.6510	99.6117	25.8826	7662	433	7696	30	29	96.6667
dgrover-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.7153	99.8632	97.5936	51.6484	5110	7	5110	126	125	99.2063
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	99.3736	99.2639	99.4836	88.1512	2697	20	2697	14	13	92.8571
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	99.3490	99.4898	99.2086	89.1572	1755	9	1755	14	13	92.8571
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	91.3043	2	0	2	0	0
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.4183	98.8433	100.0000	85.6313	940	11	940	0	0
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	99.3818	99.2284	99.5356	87.4927	1286	10	1286	6	6	100.0000
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	99.4131	99.5300	99.2966	88.5687	847	4	847	6	6	100.0000
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	94.4444	1	0	1	0	0
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.3197	98.6486	100.0000	84.6316	438	6	438	0	0
dgrover-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	99.3666	99.2968	99.4366	88.7015	1412	10	1412	8	7	87.5000
dgrover-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	99.2892	99.4524	99.1266	89.6532	908	5	908	8	7	87.5000
dgrover-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	91.3043	2	0	2	0	0
dgrover-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.5045	99.0138	100.0000	86.4030	502	5	502	0	0
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	95.1520	92.7565	97.6744	76.4794	461	36	462	11	11	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	95.2384	92.4812	98.1651	88.0482	123	10	107	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	95.7596	92.3754	99.4012	59.5152	315	26	332	2	2	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	86.7925	100.0000	76.6667	89.0511	23	0	23	7	7	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	97.4797	95.7302	99.2944	52.9989	6614	295	6614	47	42	89.3617
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	98.7710	98.6981	98.8439	73.8011	1592	21	1539	18	13	72.2222
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	97.0210	94.2544	99.9549	27.4378	4380	267	4433	2	2	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	97.4203	98.9214	95.9641	68.3987	642	7	642	27	27	100.0000
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	97.1156	95.4467	98.8438	53.2567	3333	159	3334	39	32	82.0513
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	98.0674	97.7089	98.4286	73.8024	725	17	689	11	5	45.4545
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	97.0651	94.4072	99.8769	35.3752	2397	142	2434	3	3	100.0000
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	94.4072	100.0000	89.4068	69.4696	211	0	211	25	24	96.0000
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	97.3211	96.9895	97.6551	52.0760	13370	415	13368	321	314	97.8193
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	97.4468	99.1471	95.8038	68.8013	3836	33	3790	166	160	96.3855
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	97.0467	94.6710	99.5447	27.5976	6733	379	6777	31	30	96.7742
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	97.7832	99.8930	95.7607	54.8681	2801	3	2801	124	124	100.0000
egarrison-hhga	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	96.4351	94.7749	98.1545	42.9464	6548	361	6542	123	88	71.5447
egarrison-hhga	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	96.3335	96.2182	96.4490	61.4990	1552	61	1521	56	30	53.5714
egarrison-hhga	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.9212	94.7708	99.1715	26.5340	4404	243	4429	37	35	94.5946
egarrison-hhga	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	93.1550	91.2173	95.1768	58.7259	592	57	592	30	23	76.6667
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	96.6411	95.0774	98.2571	84.2376	1352	70	1353	24	15	62.5000
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	96.3799	94.7426	98.0747	85.1647	865	48	866	17	10	58.8235
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	86.6667	2	0	2	0	0
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	97.0971	95.6607	98.5772	82.2319	485	22	485	7	5	71.4286

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