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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1055 1056 1057 1058 1059 1060 1061 1062 1063 ... 1720 1721 » 52901-52950 / 86044 show all
ciseli-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	59.0651	56.3393	62.0679	49.1269	10287	7972	10307	6299	4780	75.8851
ciseli-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	77.4749	88.1419	69.1110	56.7739	5887	792	6258	2797	1501	53.6646
ciseli-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	4.8484	0.0000	0.0000	331	6496	0	0	0
ciseli-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	65.9412	85.6091	53.6220	35.4284	4069	684	4049	3502	3279	93.6322
ciseli-custom	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	0.0000	0.0000	22.9630	94.9400	0	0	31	104	36	34.6154
ciseli-custom	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	0.0000	0.0000	73.3333	98.0645	0	0	11	4	1	25.0000
ciseli-custom	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	0.0000	0.0000	16.6667	93.6609	0	0	20	100	35	35.0000
ciseli-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	0.0000	0.0000	41.6667	96.1415	0	0	5	7	1	14.2857
ciseli-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	0.0000	0.0000	50.0000	97.0149	0	0	1	1	0	0.0000
ciseli-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	0.0000	0.0000	40.0000	95.9016	0	0	4	6	1	16.6667
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	97.3143	96.0145	98.6499	82.5698	1060	44	1096	15	12	80.0000
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	96.6872	95.4167	97.9920	85.6042	687	33	732	15	12	80.0000
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	98.5430	97.1279	100.0000	69.2827	372	11	364	0	0
cchapple-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	98.6256	98.1818	99.0734	84.3863	1242	23	1283	12	10	83.3333
cchapple-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	98.3403	97.9849	98.6982	87.4181	778	16	834	11	9	81.8182
cchapple-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	2	0	0	0	0
cchapple-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.1386	98.5075	99.7778	71.4829	462	7	449	1	1	100.0000
ciseli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	43.8454	39.1619	49.8013	62.4191	757	1176	752	758	719	94.8549
ciseli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	62.0432	53.7002	73.4554	68.7187	283	244	321	116	109	93.9655
ciseli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	4.1314	0.0000	0.0000	39	905	0	0	0
ciseli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	56.3122	94.1558	40.1678	59.0614	435	27	431	642	610	95.0156
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	97.2521	95.5720	98.9924	51.2038	2849	132	2849	29	29	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	98.9917	98.3416	99.6503	72.5659	593	10	570	2	2	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.0913	94.4749	99.8568	32.8741	2069	121	2092	3	3	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	93.7343	99.4681	88.6256	69.5087	187	1	187	24	24	100.0000
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	99.1840	99.0942	99.2740	86.3749	1094	10	1094	8	8	100.0000
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.3065	99.4444	99.1690	87.5731	716	4	716	6	6	100.0000
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	92.8571	1	0	1	0	0
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	98.9501	98.4334	99.4723	83.2597	377	6	377	2	2	100.0000
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	99.4458	99.2885	99.6035	87.7940	1256	9	1256	5	5	100.0000
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.4322	99.2443	99.6207	88.9340	788	6	788	3	3	100.0000
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	88.8889	2	0	2	0	0
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.4664	99.3603	99.5726	85.2133	466	3	466	2	2	100.0000
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	99.3235	99.1976	99.4496	87.1665	2349	19	2349	13	13	100.0000
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.3723	99.3395	99.4052	88.3238	1504	10	1504	9	9	100.0000
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	88.8889	2	0	2	0	0
ckim-dragen	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.2348	98.9437	99.5277	84.3986	843	9	843	4	4	100.0000
ckim-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	98.1527	97.7494	98.5592	55.1204	31272	720	31194	456	439	96.2719
ckim-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	98.7777	99.3930	98.1700	65.9733	12445	76	12285	229	215	93.8865

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