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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1034 1035 1036 1037 1038 1039 1040 1041 1042 ... 1720 1721 » 51851-51900 / 86044 show all
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	*	50.6371	40.3001	68.1066	40.7912	2310	3422	6748	3160	2890	91.4557
anovak-vg	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	het	50.7904	39.6185	70.7374	39.8375	540	823	5132	2123	1902	89.5902
anovak-vg	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	33.0618	0.0000	0.0000	1258	2547	0	0	0
anovak-vg	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	72.9057	90.7801	60.9122	43.2513	512	52	1616	1037	988	95.2748
anovak-vg	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	*	93.6443	95.4077	91.9449	64.3247	4633	223	4874	427	230	53.8642
anovak-vg	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	het	92.5559	94.4948	90.6950	66.9104	2918	170	3119	320	136	42.5000
anovak-vg	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
anovak-vg	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	homalt	95.6073	97.0006	94.2535	58.3072	1714	53	1755	107	94	87.8505
astatham-gatk	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	*	98.5463	98.3740	98.7193	52.5147	35997	595	35921	466	435	93.3476
astatham-gatk	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	het	98.9118	99.3147	98.5122	62.5969	15652	108	15494	234	208	88.8889
astatham-gatk	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.4632	95.4749	99.5360	33.1882	10001	474	10083	47	46	97.8723
astatham-gatk	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.0520	99.8745	98.2429	45.7715	10344	13	10344	185	181	97.8378
anovak-vg	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	*	90.7748	94.4594	87.3670	66.7807	4569	268	5007	724	345	47.6519
anovak-vg	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	het	89.0850	93.1385	85.3697	68.5884	2932	216	3256	558	215	38.5305
anovak-vg	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
anovak-vg	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	homalt	94.0474	96.9194	91.3406	62.4853	1636	52	1751	166	130	78.3133
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	*	92.1861	94.9340	89.5928	65.6359	9201	491	9857	1145	571	49.8690
anovak-vg	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	het	90.7742	93.8101	87.9287	67.8048	5850	386	6359	873	348	39.8625
anovak-vg	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
anovak-vg	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	94.8271	96.9609	92.7851	60.5360	3350	105	3498	272	223	81.9853
anovak-vg	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	*	36.9586	26.4511	61.3160	39.5013	638	1774	1696	1070	978	91.4019
anovak-vg	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	het	43.8638	34.2213	61.0721	38.4199	167	321	1390	886	815	91.9865
anovak-vg	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	20.3275	0.0000	0.0000	360	1411	0	0	0
anovak-vg	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	homalt	67.1212	72.5490	62.4490	44.0639	111	42	306	184	163	88.5870
anovak-vg	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	*	69.0612	65.8068	72.6543	37.5809	16149	8391	16741	6301	4632	73.5121
anovak-vg	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	het	76.0027	83.0403	70.0649	36.4124	8642	1765	11127	4754	3440	72.3601
anovak-vg	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	29.5818	0.0000	0.0000	2037	4849	0	0	0
anovak-vg	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	76.9105	75.4795	78.3969	40.0251	5470	1777	5614	1547	1192	77.0524
anovak-vg	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	*	63.5093	59.8218	67.6813	39.7409	21890	14702	30217	14429	11301	78.3214
anovak-vg	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	het	69.5027	72.7855	66.5031	38.8732	11471	4289	21148	10652	8272	77.6568
anovak-vg	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	27.5800	0.0000	0.0000	2889	7586	0	0	0
anovak-vg	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	71.6357	72.7045	70.5979	41.7864	7530	2827	9069	3777	3029	80.1959
anovak-vg	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	*	9.6515	5.6250	33.9623	61.7329	27	453	36	70	34	48.5714
anovak-vg	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	het	11.7647	6.8750	40.7407	67.2727	11	149	22	32	14	43.7500
anovak-vg	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	1.4337	0.0000	0.0000	4	275	0	0	0
anovak-vg	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	28.0467	29.2683	26.9231	53.5714	12	29	14	38	20	52.6316
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_11to50	*		0.0000	0.0000	83.1933	0	0	0	20	2	10.0000
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_11to50	het		0.0000	0.0000	82.6087	0	0	0	20	2	10.0000
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_11to50	homalt		0.0000		100.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	*	50.4202	43.0804	60.7748	52.4011	772	1020	753	486	332	68.3128
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	het	55.3043	53.2020	57.5796	52.8812	324	285	452	333	230	69.0691
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	19.7704	0.0000	0.0000	155	629	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	69.6845	73.4336	66.2996	51.5475	293	106	301	153	102	66.6667

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