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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
51701-51750 / 86044 show all
ckim-isaacSNP*lowcmp_SimpleRepeat_diTR_11to50homalt
95.1611
91.0564
99.6533
48.4903
31463093162115
45.4545
ckim-isaacSNPtilowcmp_SimpleRepeat_diTR_11to50*
93.1299
89.8491
96.6594
59.1348
4346491445615472
46.7532
ckim-isaacSNPtilowcmp_SimpleRepeat_diTR_11to50het
92.5831
88.2783
97.3293
62.2126
27793692879793
3.7975
ckim-isaacSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
66.6667
10100
ckim-isaacSNPtilowcmp_SimpleRepeat_diTR_11to50homalt
95.9870
92.7725
99.4322
50.3135
1566122157694
44.4444
ckim-isaacINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
66.5163
53.3333
88.3562
71.0030
2562242583420
58.8235
ckim-isaacINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
71.6705
61.2500
86.3636
81.0017
986295154
26.6667
ckim-isaacINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
62.4562
45.8781
97.7941
50.0000
12815113333
100.0000
ckim-isaacINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
68.9655
73.1707
65.2174
70.5128
3011301613
81.2500
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_diTR_11to50*
83.2650
74.7927
93.9018
56.7791
1804608181711862
52.5424
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_diTR_11to50het
83.1362
81.1475
85.2248
77.0629
396923986922
31.8841
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
83.6839
72.6708
98.6312
33.2487
128748412971813
72.2222
ckim-isaacINDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
79.4104
79.0850
79.7386
67.5159
121321223127
87.0968
ckim-vqsrINDEL*lowcmp_SimpleRepeat_diTR_11to50*
98.2046
97.6826
98.7322
52.3033
3574484835667458432
94.3231
ckim-vqsrINDEL*lowcmp_SimpleRepeat_diTR_11to50het
98.8985
99.2195
98.5796
63.0301
1563712315477223202
90.5830
ckim-vqsrINDEL*lowcmp_SimpleRepeat_diTR_11to50hetalt
96.2751
93.2220
99.5351
28.3303
976571098484646
100.0000
ckim-vqsrINDEL*lowcmp_SimpleRepeat_diTR_11to50homalt
99.0234
99.8552
98.2053
45.9033
103421510342189184
97.3545
ckim-isaacINDELI1_5lowcmp_SimpleRepeat_diTR_11to50*
91.7626
87.4564
96.5147
48.4959
5013719504018291
50.0000
ckim-isaacINDELI1_5lowcmp_SimpleRepeat_diTR_11to50het
92.0106
92.2964
91.7266
69.6573
1258105127511543
37.3913
ckim-isaacINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
92.0493
86.2286
98.7126
25.5959
328152432974335
81.3953
ckim-isaacINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
89.2397
84.0426
95.1220
53.9757
474904682413
54.1667
ckim-isaacSNPtvlowcmp_SimpleRepeat_diTR_11to50*
92.3491
87.7265
97.4860
57.2867
4260596434311272
64.2857
ckim-isaacSNPtvlowcmp_SimpleRepeat_diTR_11to50het
92.2085
86.7552
98.3934
61.1512
26794092756458
17.7778
ckim-isaacSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
66.6667
10100
ckim-isaacSNPtvlowcmp_SimpleRepeat_diTR_11to50homalt
94.3567
89.4171
99.8741
46.5320
1580187158621
50.0000
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_diTR_11to50*
96.5108
94.0299
99.1263
61.5359
226814422692015
75.0000
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_diTR_11to50het
98.5380
97.9508
99.1323
82.5906
4781045740
0.0000
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
95.9847
92.4337
99.8195
35.5314
1637134165933
100.0000
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
95.9248
100.0000
92.1687
77.1034
15301531312
92.3077
ckim-vqsrINDELD1_5lowcmp_SimpleRepeat_diTR_11to50*
98.6077
98.1214
99.0988
41.2220
2407946124081219210
95.8904
ckim-vqsrINDELD1_5lowcmp_SimpleRepeat_diTR_11to50het
99.2848
99.4427
99.1274
50.6623
1034958103389183
91.2088
ckim-vqsrINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
96.8165
94.2782
99.4953
23.7106
649239465053333
100.0000
ckim-vqsrINDELD1_5lowcmp_SimpleRepeat_diTR_11to50homalt
99.2867
99.8758
98.7045
36.9692
7238972389594
98.9474
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_diTR_11to50*
97.7733
97.4942
98.0540
45.3637
92212379221183179
97.8142
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_diTR_11to50het
97.8789
99.1218
96.6667
63.6387
27092426979390
96.7742
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
97.4580
95.5784
99.4130
24.4663
456121145732727
100.0000
ckim-vqsrINDELD6_15lowcmp_SimpleRepeat_diTR_11to50homalt
98.3615
99.8976
96.8719
41.6063
1951219516362
98.4127
ckim-vqsrINDELC1_5lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC1_5lowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC1_5lowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
97.9637
97.9911
97.9364
69.6975
17563617563731
83.7838
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
97.3574
99.5074
95.2984
84.1819
60635272622
84.6154
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
97.7528
96.0459
99.5215
32.8514
7533183244
100.0000
ckim-vqsrINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
98.8792
99.4987
98.2673
65.6463
397239775
71.4286
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_diTR_11to50*
97.3268
94.9581
99.8166
57.9977
54432895444109
90.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_diTR_11to50het
99.2975
98.8995
99.6988
78.3007
134815132443
75.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
96.2661
92.8252
99.9719
25.4244
3532273355711
100.0000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
99.4700
99.8227
99.1197
72.8749
563156355
100.0000
ckim-vqsrINDELC6_15lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
0.0000
00000