PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
50551-50600 / 86044 show all | |||||||||||||||
| rpoplin-dv42 | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 64.6644 | 48.0447 | 98.8636 | 26.6667 | 86 | 93 | 87 | 1 | 1 | 100.0000 | |
| rpoplin-dv42 | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_51to200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_51to200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | * | 81.8346 | 80.5442 | 83.1669 | 54.9775 | 592 | 143 | 583 | 118 | 117 | 99.1525 | |
| rpoplin-dv42 | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | het | 68.7241 | 97.0414 | 53.2000 | 69.5122 | 164 | 5 | 133 | 117 | 117 | 100.0000 | |
| rpoplin-dv42 | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 82.3056 | 69.9317 | 100.0000 | 33.4008 | 307 | 132 | 329 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 97.1888 | 95.2756 | 99.1803 | 49.7942 | 121 | 6 | 121 | 1 | 0 | 0.0000 | |
| qzeng-custom | INDEL | D6_15 | lowcmp_SimpleRepeat_diTR_51to200 | * | 52.6084 | 47.9255 | 58.3056 | 39.7096 | 566 | 615 | 702 | 502 | 328 | 65.3386 | |
| qzeng-custom | INDEL | D6_15 | lowcmp_SimpleRepeat_diTR_51to200 | het | 62.5431 | 70.2703 | 56.3470 | 39.8682 | 104 | 44 | 617 | 478 | 306 | 64.0167 | |
| qzeng-custom | INDEL | D6_15 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 43.4633 | 100.0000 | 379 | 493 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | D6_15 | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 62.0711 | 51.5528 | 77.9817 | 37.7143 | 83 | 78 | 85 | 24 | 22 | 91.6667 | |
| qzeng-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | * | 44.0143 | 35.8696 | 56.9444 | 58.6207 | 33 | 59 | 41 | 31 | 27 | 87.0968 | |
| qzeng-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | het | 62.9921 | 66.6667 | 59.7015 | 56.2092 | 6 | 3 | 40 | 27 | 24 | 88.8889 | |
| qzeng-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 49.0909 | 32.5301 | 100.0000 | 83.3333 | 27 | 56 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 0.0000 | 73.3333 | 0 | 0 | 0 | 4 | 3 | 75.0000 | ||
| raldana-dualsentieon | INDEL | * | lowcmp_SimpleRepeat_diTR_51to200 | * | 82.1683 | 78.7720 | 85.8708 | 53.3827 | 1655 | 446 | 1568 | 258 | 253 | 98.0620 | |
| raldana-dualsentieon | INDEL | * | lowcmp_SimpleRepeat_diTR_51to200 | het | 73.4719 | 85.9184 | 64.1753 | 76.0494 | 421 | 69 | 249 | 139 | 136 | 97.8417 | |
| raldana-dualsentieon | INDEL | * | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 82.8264 | 70.6869 | 100.0000 | 30.6648 | 885 | 367 | 970 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 84.4015 | 97.2145 | 74.5726 | 47.8842 | 349 | 10 | 349 | 119 | 117 | 98.3193 | |
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | * | 46.0465 | 32.0388 | 81.8182 | 76.5957 | 66 | 140 | 18 | 4 | 4 | 100.0000 | |
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | het | 79.3333 | 77.7778 | 80.9524 | 75.8621 | 21 | 6 | 17 | 4 | 4 | 100.0000 | |
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 25.1397 | 100.0000 | 45 | 134 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 0.0000 | 100.0000 | 80.0000 | 0 | 0 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | * | 26.6667 | 25.0000 | 28.5714 | 75.0000 | 1 | 3 | 2 | 5 | 3 | 60.0000 | |
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | het | 36.3636 | 50.0000 | 28.5714 | 68.1818 | 1 | 1 | 2 | 5 | 3 | 60.0000 | |
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | SNP | tv | lowcmp_SimpleRepeat_diTR_51to200 | * | 80.0000 | 76.9231 | 83.3333 | 97.2758 | 20 | 6 | 20 | 4 | 1 | 25.0000 | |
| qzeng-custom | SNP | tv | lowcmp_SimpleRepeat_diTR_51to200 | het | 72.7273 | 70.5882 | 75.0000 | 97.7654 | 12 | 5 | 12 | 4 | 1 | 25.0000 | |
| qzeng-custom | SNP | tv | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | SNP | tv | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 94.1176 | 88.8889 | 100.0000 | 95.1220 | 8 | 1 | 8 | 0 | 0 | ||
| qzeng-custom | SNP | * | lowcmp_SimpleRepeat_diTR_51to200 | * | 80.0000 | 80.9524 | 79.0698 | 97.5058 | 34 | 8 | 34 | 9 | 1 | 11.1111 | |
| qzeng-custom | SNP | * | lowcmp_SimpleRepeat_diTR_51to200 | het | 71.4286 | 74.0741 | 68.9655 | 97.9374 | 20 | 7 | 20 | 9 | 1 | 11.1111 | |
| qzeng-custom | SNP | * | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | SNP | * | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 96.5517 | 93.3333 | 100.0000 | 95.5836 | 14 | 1 | 14 | 0 | 0 | ||
| qzeng-custom | SNP | ti | lowcmp_SimpleRepeat_diTR_51to200 | * | 80.0000 | 87.5000 | 73.6842 | 97.7778 | 14 | 2 | 14 | 5 | 0 | 0.0000 | |
| qzeng-custom | SNP | ti | lowcmp_SimpleRepeat_diTR_51to200 | het | 69.5652 | 80.0000 | 61.5385 | 98.1429 | 8 | 2 | 8 | 5 | 0 | 0.0000 | |
| qzeng-custom | SNP | ti | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | SNP | ti | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.1039 | 6 | 0 | 6 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | * | 50.0000 | 50.0000 | 50.0000 | 83.3333 | 2 | 2 | 2 | 2 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | het | 0.0000 | 50.0000 | 0.0000 | 93.3333 | 1 | 1 | 0 | 1 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 66.6667 | 50.0000 | 100.0000 | 66.6667 | 1 | 1 | 2 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 0.0000 | 66.6667 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | * | 71.8285 | 56.3107 | 99.1525 | 56.4576 | 116 | 90 | 117 | 1 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | het | 73.3333 | 81.4815 | 66.6667 | 96.8750 | 22 | 5 | 2 | 1 | 0 | 0.0000 | |
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 68.8645 | 52.5140 | 100.0000 | 28.5714 | 94 | 85 | 115 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||