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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 953 954 955 956 957 958 959 960 961 ... 1720 1721 » 47801-47850 / 86044 show all
ckim-gatk	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.7545	99.6496	99.8596	26.6735	1422	5	1422	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.6807	99.5745	99.7872	69.5003	468	2	469	1	1	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	97.7124	95.5272	100.0000	30.1402	299	14	299	0	0
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.6269	100.0000	99.2565	66.2060	267	0	267	2	2	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.5192	99.0431	100.0000	47.9899	414	4	414	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	het	99.1736	98.3607	100.0000	63.0435	120	2	119	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.5763	99.1561	100.0000	23.6246	235	2	236	0	0
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	100.0000	100.0000	100.0000	64.2424	59	0	59	0	0
ckim-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	99.3671	100.0000	98.7421	70.8257	157	0	157	2	0	0.0000
ckim-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het	98.3051	100.0000	96.6667	82.3529	61	0	58	2	0	0.0000
ckim-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt	100.0000	100.0000	100.0000	22.8571	51	0	54	0	0
ckim-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	homalt	100.0000	100.0000	100.0000	66.6667	45	0	45	0	0
ckim-isaac	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	*		0.0000	0.0000	0.0000	0	1	0	0	0
ckim-isaac	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	het		0.0000	0.0000	0.0000	0	1	0	0	0
ckim-isaac	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	96.2675	94.3265	98.2901	38.7683	6351	382	6323	110	70	63.6364
ckim-isaac	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	het	96.4258	95.4620	97.4092	41.9487	3492	166	3459	92	56	60.8696
ckim-isaac	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt	94.7339	90.5742	99.2941	29.5191	836	87	844	6	5	83.3333
ckim-isaac	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	96.6320	94.0056	99.4094	36.1609	2023	129	2020	12	9	75.0000
ckim-isaac	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	*	98.0651	97.0076	99.1459	33.5614	3955	122	3947	34	24	70.5882
ckim-isaac	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	het	98.2135	97.8118	98.6185	35.4245	2235	50	2213	31	21	67.7419
ckim-isaac	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	97.2482	95.2381	99.3450	30.3951	440	22	455	3	3	100.0000
ckim-isaac	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	98.0843	96.2406	100.0000	31.1996	1280	50	1279	0	0
ckim-isaac	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	*	95.0368	92.4855	97.7328	30.1370	1600	130	1595	37	31	83.7838
ckim-isaac	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	het	94.6365	93.5989	95.6973	34.7531	658	45	645	29	24	82.7586
ckim-isaac	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	95.7409	92.2945	99.4545	25.2717	539	45	547	3	3	100.0000
ckim-isaac	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	94.7121	90.9707	98.7745	28.0423	403	40	403	5	4	80.0000
ckim-isaac	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	84.2857	75.1592	95.9350	54.2751	118	39	118	5	2	40.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het	78.7229	70.4918	89.1304	63.2000	43	18	41	5	2	40.0000
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt	84.0909	72.5490	100.0000	42.6471	37	14	39	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	homalt	91.5663	84.4444	100.0000	50.0000	38	7	38	0	0
ckim-gatk	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	*	99.7825	99.7971	99.7680	39.6992	3443	7	3440	8	2	25.0000
ckim-gatk	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	het	99.8130	100.0000	99.6267	42.4234	2138	0	2135	8	2	25.0000
ckim-gatk	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000		100.0000	0	1	0	0	0
ckim-gatk	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.7706	99.5423	100.0000	34.5537	1305	6	1305	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	*	99.7253	99.7681	99.6824	38.1649	3442	8	3453	11	4	36.3636
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	het	99.6745	99.8597	99.4900	40.5130	2135	3	2146	11	4	36.3636
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000		100.0000	0	1	0	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.8472	99.6949	100.0000	33.7893	1307	4	1307	0	0
ckim-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	*	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	het	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0

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