PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
4651-4700 / 86044 show all
eyeh-varpipeINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELC16_PLUSfunc_cdshomalt
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5func_cds*
0.0000
0.0000
100.0000
95.0000
00100
eyeh-varpipeINDELC1_5func_cdshet
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5func_cdshetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC1_5func_cdshomalt
0.0000
0.0000
100.0000
88.8889
00100
egarrison-hhgaSNPtvfunc_cds*
99.9543
100.0000
99.9086
28.4546
43710437140
0.0000
egarrison-hhgaSNPtvfunc_cdshet
99.9248
100.0000
99.8497
29.2851
26570265740
0.0000
egarrison-hhgaSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
56.5217
1001000
egarrison-hhgaSNPtvfunc_cdshomalt
100.0000
100.0000
100.0000
26.8356
17040170400
egarrison-hhgaINDELI1_5func_cds*
99.4475
100.0000
98.9011
32.0896
180018020
0.0000
egarrison-hhgaINDELI1_5func_cdshet
98.3333
100.0000
96.7213
36.4583
5905920
0.0000
egarrison-hhgaINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
50.0000
20200
egarrison-hhgaINDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
29.1667
119011900
egarrison-hhgaSNP*func_cds*
99.9477
99.9725
99.9229
23.9159
18145518145140
0.0000
egarrison-hhgaSNP*func_cdshet
99.9239
99.9731
99.8747
24.7221
11158311158140
0.0000
egarrison-hhgaSNP*func_cdshetalt
100.0000
100.0000
100.0000
56.5217
1001000
egarrison-hhgaSNP*func_cdshomalt
99.9857
99.9713
100.0000
22.5036
69772697700
egarrison-hhgaSNPtifunc_cds*
99.9456
99.9637
99.9275
22.3817
13782513782100
0.0000
egarrison-hhgaSNPtifunc_cdshet
99.9236
99.9647
99.8825
23.1721
850138501100
0.0000
egarrison-hhgaSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
52.9412
80800
egarrison-hhgaSNPtifunc_cdshomalt
99.9810
99.9621
100.0000
20.9919
52732527300
egarrison-hhgaINDELI6_15func_cds*
98.8235
97.6744
100.0000
36.3636
4214200
egarrison-hhgaINDELI6_15func_cdshet
100.0000
100.0000
100.0000
38.4615
2402400
egarrison-hhgaINDELI6_15func_cdshetalt
85.7143
75.0000
100.0000
0.0000
31300
egarrison-hhgaINDELI6_15func_cdshomalt
100.0000
100.0000
100.0000
37.5000
1501500
eyeh-varpipeINDELI1_5func_cds*
98.6417
98.8889
98.3957
28.6260
178218432
66.6667
eyeh-varpipeINDELI1_5func_cdshet
97.4503
98.3051
96.6102
34.4444
5815721
50.0000
eyeh-varpipeINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
62.5000
20300
eyeh-varpipeINDELI1_5func_cdshomalt
99.1798
99.1597
99.2000
23.7805
118112411
100.0000
eyeh-varpipeINDELI6_15func_cds*
88.6076
81.3953
97.2222
32.0755
3583511
100.0000
eyeh-varpipeINDELI6_15func_cdshet
88.3721
79.1667
100.0000
29.6296
1951900
eyeh-varpipeINDELI6_15func_cdshetalt
57.1429
50.0000
66.6667
62.5000
22211
100.0000
eyeh-varpipeINDELI6_15func_cdshomalt
96.5517
93.3333
100.0000
22.2222
1411400
eyeh-varpipeINDELI16_PLUSfunc_cds*
66.6667
50.0000
100.0000
45.4545
66600
eyeh-varpipeINDELI16_PLUSfunc_cdshet
61.5385
44.4444
100.0000
33.3333
45400
eyeh-varpipeINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
eyeh-varpipeINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
60.0000
20200
eyeh-varpipeINDELC6_15func_cds*
0.0000
100.0000
00000
eyeh-varpipeINDELC6_15func_cdshet
0.0000
100.0000
00000
eyeh-varpipeINDELC6_15func_cdshetalt
0.0000
100.0000
00000
eyeh-varpipeINDELC6_15func_cdshomalt
0.0000
100.0000
00000
eyeh-varpipeINDELD1_5func_cds*
98.4442
98.7421
98.1481
31.3559
157215932
66.6667
eyeh-varpipeINDELD1_5func_cdshet
98.3051
100.0000
96.6667
34.3066
8508732
66.6667
eyeh-varpipeINDELD1_5func_cdshetalt
0.0000
100.0000
00000
eyeh-varpipeINDELD1_5func_cdshomalt
98.6301
97.2973
100.0000
24.2105
7227200
eyeh-varpipeINDELD6_15func_cds*
87.9743
83.7209
92.6829
46.7532
3673833
100.0000
eyeh-varpipeINDELD6_15func_cdshet
89.6552
89.6552
89.6552
38.2979
2632633
100.0000
eyeh-varpipeINDELD6_15func_cdshetalt
66.6667
50.0000
100.0000
66.6667
11200
eyeh-varpipeINDELD6_15func_cdshomalt
85.7143
75.0000
100.0000
58.3333
931000