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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 930 931 932 933 934 935 936 937 938 ... 1720 1721 » 46651-46700 / 86044 show all
gduggal-bwaplat	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	*		0.0000		100.0000	0	1	0	0	0
gduggal-bwaplat	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	het		0.0000		100.0000	0	1	0	0	0
gduggal-bwaplat	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	*	83.0598	71.3760	99.3174	53.6319	2910	1167	2910	20	10	50.0000
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	het	81.0867	68.5777	99.1772	58.7467	1567	718	1567	13	5	38.4615
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	92.9480	87.0130	99.7519	36.5354	402	60	402	1	1	100.0000
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	82.6526	70.7519	99.3664	48.9213	941	389	941	6	4	66.6667
gduggal-bwaplat	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	*	86.9339	77.1098	99.6266	47.5519	1334	396	1334	5	2	40.0000
gduggal-bwaplat	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	het	81.2447	68.7055	99.3827	61.1200	483	220	483	3	0	0.0000
gduggal-bwaplat	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	91.7821	85.1027	99.5992	26.0741	497	87	497	2	2	100.0000
gduggal-bwaplat	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	88.8331	79.9097	100.0000	43.6306	354	89	354	0	0
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	80.1527	66.8790	100.0000	72.1485	105	52	105	0	0
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het	72.9167	57.3770	100.0000	85.5967	35	26	35	0	0
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt	84.0909	72.5490	100.0000	39.3443	37	14	37	0	0
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	homalt	84.6154	73.3333	100.0000	54.7945	33	12	33	0	0
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	80.2831	67.3994	99.2563	60.8562	4538	2195	4538	34	12	35.2941
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	het	76.9385	62.9306	98.9682	67.0678	2302	1356	2302	24	5	20.8333
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt	89.8810	81.7985	99.7358	39.7772	755	168	755	2	2	100.0000
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	81.3513	68.8197	99.4627	55.6845	1481	671	1481	8	5	62.5000
gduggal-bwavard	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	*	98.2001	97.4711	98.9400	41.0943	7169	186	7094	76	20	26.3158
gduggal-bwavard	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	het	98.0250	97.6820	98.3704	46.6267	4509	107	4467	74	19	25.6757
gduggal-bwavard	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-bwavard	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	98.5181	97.1512	99.9239	28.2478	2660	78	2627	2	1	50.0000
gduggal-bwavard	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	*	97.5587	96.4058	98.7395	42.1025	3326	124	3290	42	14	33.3333
gduggal-bwavard	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	het	97.5197	96.9598	98.0861	47.0350	2073	65	2050	40	13	32.5000
gduggal-bwavard	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-bwavard	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	homalt	97.6609	95.5759	99.8390	31.3433	1253	58	1240	2	1	50.0000
gduggal-snapfb	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	90.8156	88.7866	92.9396	44.8670	5978	755	6279	477	242	50.7338
gduggal-snapfb	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	het	90.8048	89.3111	92.3494	45.1133	3267	391	4092	339	139	41.0029
gduggal-snapfb	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt	85.4625	82.9902	88.0866	50.9735	766	157	244	33	29	87.8788
gduggal-snapfb	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	92.5726	90.3810	94.8730	43.3628	1945	207	1943	105	74	70.4762
gduggal-bwavard	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	*	98.7388	98.3871	99.0930	40.5118	3843	63	3824	35	6	17.1429
gduggal-bwavard	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	het	98.4421	98.3051	98.5795	46.6205	2436	42	2429	35	6	17.1429
gduggal-bwavard	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-bwavard	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.2943	98.5985	100.0000	25.4409	1407	20	1395	0	0
gduggal-snapfb	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	*	100.0000	100.0000	100.0000	66.6667	1	0	1	0	0
gduggal-snapfb	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	het	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
gduggal-snapfb	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt		0.0000		100.0000	0	0	0	0	0

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