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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
42951-43000 / 86044 show all
gduggal-bwaplatINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
75.7488
61.1544
99.4924
57.4514
39224939222
100.0000
gduggal-bwaplatINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
62.8931
46.2963
98.0392
83.4684
10011610022
100.0000
gduggal-bwafbSNP*lowcmp_SimpleRepeat_quadTR_11to50*
98.5802
99.1091
98.0569
48.2748
180211621806635880
22.3464
gduggal-bwafbSNP*lowcmp_SimpleRepeat_quadTR_11to50het
98.1685
99.1166
97.2384
51.9217
113321011137332359
18.2663
gduggal-bwafbSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
90.9091
100.0000
83.3333
64.7059
50511
100.0000
gduggal-bwafbSNP*lowcmp_SimpleRepeat_quadTR_11to50homalt
99.2945
99.0956
99.4942
40.3814
66846166883420
58.8235
gduggal-bwafbSNPtilowcmp_SimpleRepeat_quadTR_11to50*
98.4458
98.9378
97.9586
49.7551
106181141065322258
26.1261
gduggal-bwafbSNPtilowcmp_SimpleRepeat_quadTR_11to50het
98.0823
99.0065
97.1751
54.0902
667767670819542
21.5385
gduggal-bwafbSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
66.6667
100.0000
50.0000
75.0000
10111
100.0000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
99.0824
98.8212
99.3451
39.8485
39404739442615
57.6923
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_quadTR_11to50*
98.7673
99.3559
98.1857
45.9987
740448741413723
16.7883
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_quadTR_11to50het
98.2925
99.2749
97.3294
48.4124
465534466512817
13.2812
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
90.9091
100.0000
83.3333
64.7059
50511
100.0000
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_quadTR_11to50homalt
99.6007
99.4924
99.7093
41.1337
274414274485
62.5000
gduggal-bwafbINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
80.9161
72.4451
91.6304
55.0342
9573648437776
98.7013
gduggal-bwafbINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
79.3169
69.8276
91.7910
57.6285
3241404924443
97.7273
gduggal-bwafbINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
80.7025
72.6989
90.6863
50.9615
4661751851919
100.0000
gduggal-bwafbINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
84.1131
77.3148
92.2222
50.6849
167491661414
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
96.8644
95.1747
98.6151
48.2628
113025731132215995
59.7484
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
96.6527
94.4759
98.9323
48.2177
634537170427621
27.6316
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
95.1686
91.6276
98.9943
43.0908
136812568977
100.0000
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
97.9135
97.8996
97.9275
49.2246
35897735917667
88.1579
gduggal-bwafbINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
50.6365
36.0825
84.8684
57.8947
1402481292323
100.0000
gduggal-bwafbINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
49.1036
34.5238
85.0000
53.9171
58110851515
100.0000
gduggal-bwafbINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
49.6165
35.4286
82.7586
60.8108
621132455
100.0000
gduggal-bwafbINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
58.8235
44.4444
86.9565
67.1429
20252033
100.0000
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50*
92.5216
89.4845
95.7722
64.1176
34894103330147104
70.7483
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50het
92.4658
89.4891
95.6473
67.6067
152417916927741
53.2468
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
90.6525
87.0027
94.6221
51.2057
9841476513736
97.2973
gduggal-bwafbINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
94.3814
92.1127
96.7647
63.8170
981849873327
81.8182
gduggal-bwafbINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50*
93.9002
90.2088
97.9065
45.7445
332636134147365
89.0411
gduggal-bwafbINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50het
93.0590
87.7946
98.9950
44.8626
145320223642416
66.6667
gduggal-bwafbINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
92.7348
88.8325
96.9957
40.7125
105013222677
100.0000
gduggal-bwafbINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
95.9795
96.8235
95.1501
49.1486
823278244242
100.0000
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50*
99.3072
99.1321
99.4829
51.2667
36553236551916
84.2105
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50het
99.4556
99.3958
99.5154
60.4361
164510164385
62.5000
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.8510
98.2234
99.4867
27.7056
116121116366
100.0000
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
99.6479
99.8824
99.4145
51.1721
849184955
100.0000
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
98.7080
98.4536
98.9637
75.6774
382638241
25.0000
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
98.2107
98.8095
97.6190
78.5987
166216441
25.0000
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
98.8439
97.7143
100.0000
66.4078
171417300
bgallagher-sentieonINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
100.0000
100.0000
100.0000
84.3206
4504500
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
99.6716
99.6463
99.6968
50.6032
1183342118383619
52.7778
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
99.6951
99.7767
99.6136
53.1211
6701156703269
34.6154
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
99.0215
98.2585
99.7963
32.1198
146726147033
100.0000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
99.8910
99.9727
99.8094
51.1312
36651366577
100.0000
bgallagher-sentieonINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
0.0000
00000