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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
42801-42850 / 86044 show all
gduggal-bwavardINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
56.5217
91.5751
0026208
40.0000
gduggal-bwavardINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
52.3810
91.4634
0022208
40.0000
gduggal-bwavardINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
100.0000
92.5926
00400
gduggal-bwavardINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
47.7477
40.9794
57.1942
72.9835
15922915911985
71.4286
gduggal-bwavardINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
65.3542
82.1429
54.2636
73.2919
1383014011884
71.1864
gduggal-bwavardINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.5714
0.0000
0.0000
1174000
gduggal-bwavardINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
60.5578
44.4444
95.0000
68.2540
20251911
100.0000
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50*
72.0146
63.6573
82.8979
66.4923
248214172443504406
80.5556
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50het
84.9732
95.9483
76.2512
71.1719
1634691615503405
80.5169
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.6189
0.0000
0.0000
71124000
gduggal-bwavardINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
88.2006
78.9671
99.8794
42.7486
84122482811
100.0000
gduggal-bwavardINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
46.7905
38.6828
59.1981
64.3248
511810502346329
95.0867
gduggal-bwavardINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
67.2522
88.7931
54.1223
65.4094
41252407345328
95.0725
gduggal-bwavardINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.4680
0.0000
0.0000
3638000
gduggal-bwavardINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
61.3398
44.4444
98.9583
52.7094
961209511
100.0000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
78.2056
76.4379
80.0570
49.9353
90772798898822391967
87.8517
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
84.9665
98.6599
74.6109
52.3621
662690656822351963
87.8300
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.2679
0.0000
0.0000
41489000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
80.0060
66.7485
99.8350
38.5707
24471219242044
100.0000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50*
58.2911
54.3260
62.8805
55.6252
20031684200411831139
96.2806
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50het
72.6802
97.7039
57.8610
56.5116
161738162311821138
96.2775
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.2538
0.0000
0.0000
31179000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
62.0743
45.0588
99.7382
47.8142
38346738111
100.0000
gduggal-bwavardINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
62.3288
90.0950
01915510
18.1818
gduggal-bwavardINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
55.6452
90.5847
01695510
18.1818
gduggal-bwavardINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
100.0000
85.9873
002200
gduggal-bwavardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
55.2529
51.8248
59.1667
72.9556
497462497343309
90.0875
gduggal-bwavardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
67.8403
94.5137
52.9086
74.2327
37922382340307
90.2941
gduggal-bwavardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.3049
0.0000
0.0000
1327000
gduggal-bwavardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
66.8472
50.8696
97.4576
61.1842
11711311532
66.6667
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_quadTR_11to50*
96.7237
99.6377
93.9753
40.8977
742527706645322
4.8565
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_quadTR_11to50het
95.1371
99.6801
90.9901
43.0795
467415439343514
3.2184
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
99.3289
100.0000
98.6667
70.3557
507411
100.0000
eyeh-varpipeSNPtvlowcmp_SimpleRepeat_quadTR_11to50homalt
99.4574
99.5649
99.3502
34.3868
2746122599177
41.1765
eyeh-varpipeSNPtilowcmp_SimpleRepeat_quadTR_11to50*
97.4056
99.5621
95.3406
49.3281
10685471049751352
10.1365
eyeh-varpipeSNPtilowcmp_SimpleRepeat_quadTR_11to50het
96.5155
99.7628
93.4730
54.4025
672816655945833
7.2052
eyeh-varpipeSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
98.0392
100.0000
96.1538
79.7665
105022
100.0000
eyeh-varpipeSNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
98.9380
99.2225
98.6552
35.2022
39563138885317
32.0755
gduggal-bwafbINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
0.0000
100.0000
00000
gduggal-bwafbINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
0.0000
100.0000
00000
gduggal-bwafbINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbINDELC16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
100.0000
00000
gduggal-bwafbINDEL*lowcmp_SimpleRepeat_quadTR_11to50*
93.9385
90.7361
97.3752
52.7808
18022184018957511394
77.1037
gduggal-bwafbINDEL*lowcmp_SimpleRepeat_quadTR_11to50het
93.7221
89.8362
97.9593
52.4760
9979112912193254153
60.2362
gduggal-bwafbINDEL*lowcmp_SimpleRepeat_quadTR_11to50hetalt
88.7892
84.1909
93.9189
55.0542
22584249736362
98.4127
gduggal-bwafbINDEL*lowcmp_SimpleRepeat_quadTR_11to50homalt
96.0102
95.2734
96.7586
52.9962
57852875791194179
92.2680
gduggal-bwafbINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
85.7428
78.4150
94.5813
55.1133
7522077684443
97.7273
gduggal-bwafbINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
80.2269
68.5786
96.6418
53.7532
2751265181817
94.4444