PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
4201-4250 / 86044 show all
anovak-vgINDELI6_15func_cds*
63.7892
60.4651
67.5000
37.5000
2617271310
76.9231
anovak-vgINDELI6_15func_cdshet
56.0784
45.8333
72.2222
40.0000
11131353
60.0000
anovak-vgINDELI6_15func_cdshetalt
0.0000
25.0000
0.0000
0.0000
13000
anovak-vgINDELI6_15func_cdshomalt
75.6757
93.3333
63.6364
35.2941
1411487
87.5000
hfeng-pmm1INDELD1_5func_cds*
99.6885
100.0000
99.3789
38.0769
159016010
0.0000
hfeng-pmm1INDELD1_5func_cdshet
99.4220
100.0000
98.8506
43.8710
8508610
0.0000
hfeng-pmm1INDELD1_5func_cdshetalt
0.0000
100.0000
00000
hfeng-pmm1INDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
27.4510
7407400
hfeng-pmm1INDELD6_15func_cds*
100.0000
100.0000
100.0000
50.0000
4304300
hfeng-pmm1INDELD6_15func_cdshet
100.0000
100.0000
100.0000
46.2963
2902900
hfeng-pmm1INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
hfeng-pmm1INDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
55.5556
1201200
hfeng-pmm1INDELD16_PLUSfunc_cds*
91.6667
91.6667
91.6667
71.4286
1111110
0.0000
hfeng-pmm1INDELD16_PLUSfunc_cdshet
87.5000
87.5000
87.5000
75.0000
71710
0.0000
hfeng-pmm1INDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
60.0000
40400
ghariani-varprowlSNPtvfunc_cds*
99.2142
99.6568
98.7755
38.2266
4356154356545
9.2593
ghariani-varprowlSNPtvfunc_cdshet
99.0291
99.8118
98.2586
43.0471
265252652470
0.0000
ghariani-varprowlSNPtvfunc_cdshetalt
0.0000
0.0000
0.0000
010000
ghariani-varprowlSNPtvfunc_cdshomalt
99.7950
100.0000
99.5909
28.7083
17040170475
71.4286
hfeng-pmm1INDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC1_5func_cds*
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC1_5func_cdshet
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC1_5func_cdshomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15func_cds*
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15func_cdshet
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15func_cdshetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC6_15func_cdshomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDEL*func_cds*
99.4386
99.3258
99.5516
42.1530
442344420
0.0000
hfeng-pmm1INDEL*func_cdshet
99.0697
99.0654
99.0741
46.6667
212221420
0.0000
hfeng-pmm1INDEL*func_cdshetalt
88.8889
80.0000
100.0000
66.6667
41400
hfeng-pmm1INDEL*func_cdshomalt
100.0000
100.0000
100.0000
36.1582
226022600
hfeng-pmm1INDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDEL*func_cds*
99.4386
99.3258
99.5516
44.3196
442344420
0.0000
hfeng-pmm2INDEL*func_cdshet
99.0697
99.0654
99.0741
49.1765
212221420
0.0000
hfeng-pmm2INDEL*func_cdshetalt
88.8889
80.0000
100.0000
66.6667
41400
hfeng-pmm2INDEL*func_cdshomalt
100.0000
100.0000
100.0000
37.9121
226022600
hfeng-pmm2INDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNPtvfunc_cds*
99.9314
99.9542
99.9085
27.9499
43692436840
0.0000
hfeng-pmm1SNPtvfunc_cdshet
99.8871
99.9247
99.8495
28.9115
26552265440
0.0000
hfeng-pmm1SNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
62.9630
1001000
hfeng-pmm1SNPtvfunc_cdshomalt
100.0000
100.0000
100.0000
25.9774
17040170400
hfeng-pmm1INDELI16_PLUSfunc_cds*
95.6522
91.6667
100.0000
73.8095
1111100
hfeng-pmm1INDELI16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
59.0909
90900