PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
4151-4200 / 86044 show all
asubramanian-gatkINDELC6_15func_cdshetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC6_15func_cdshomalt
0.0000
0.0000
0.0000
00000
astatham-gatkSNPtifunc_cds*
99.8730
99.7897
99.9564
22.5679
13758291375660
0.0000
astatham-gatkSNPtifunc_cdshet
99.8234
99.7178
99.9293
24.2094
848024847860
0.0000
astatham-gatkSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
46.6667
80800
astatham-gatkSNPtifunc_cdshomalt
99.9526
99.9052
100.0000
19.7136
52705527000
asubramanian-gatkINDEL*func_cds*
98.8729
98.4270
99.3228
86.9360
438744031
33.3333
asubramanian-gatkINDEL*func_cdshet
98.5959
98.1308
99.0654
61.0909
210421220
0.0000
asubramanian-gatkINDEL*func_cdshetalt
88.8889
80.0000
100.0000
63.6364
41400
asubramanian-gatkINDEL*func_cdshomalt
99.3348
99.1150
99.5556
39.8396
224222411
100.0000
asubramanian-gatkINDELC16_PLUSfunc_cds*
0.0000
100.0000
00000
asubramanian-gatkINDELC16_PLUSfunc_cdshet
0.0000
100.0000
00000
asubramanian-gatkINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5func_cds*
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5func_cdshet
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5func_cdshomalt
0.0000
100.0000
00000
astatham-gatkSNPtvfunc_cds*
99.8283
99.7483
99.9083
29.1951
436011435940
0.0000
astatham-gatkSNPtvfunc_cdshet
99.7173
99.5860
99.8490
31.6916
264611264540
0.0000
astatham-gatkSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
56.5217
1001000
astatham-gatkSNPtvfunc_cdshomalt
100.0000
100.0000
100.0000
24.6351
17040170400
astatham-gatkINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5func_cds*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5func_cdshet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5func_cdshomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDEL*func_cds*
99.5531
99.7753
99.3318
44.9080
444144631
33.3333
astatham-gatkINDEL*func_cdshet
99.5392
100.0000
99.0826
50.0000
214021620
0.0000
astatham-gatkINDEL*func_cdshetalt
88.8889
80.0000
100.0000
60.0000
41400
astatham-gatkINDEL*func_cdshomalt
99.7792
100.0000
99.5595
38.4824
226022611
100.0000
anovak-vgINDELI1_5func_cds*
77.5623
77.7778
77.3481
34.6570
140401404129
70.7317
anovak-vgINDELI1_5func_cdshet
53.0612
44.0678
66.6667
45.0704
263326133
23.0769
anovak-vgINDELI1_5func_cdshetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELI1_5func_cdshomalt
87.3563
95.7983
80.2817
31.0680
11451142826
92.8571
anovak-vgSNP*func_cds*
98.5581
98.0331
99.0887
29.8522
1779335717724163111
68.0982
anovak-vgSNP*func_cdshet
98.2393
97.5540
98.9342
34.7247
108882731086111770
59.8291
anovak-vgSNP*func_cdshetalt
0.0000
30.0000
0.0000
0.0000
37000
anovak-vgSNP*func_cdshomalt
99.1150
98.8967
99.3342
20.4124
69027768634641
89.1304
anovak-vgSNPtifunc_cds*
98.6277
98.0852
99.1763
27.7317
135232641348611279
70.5357
anovak-vgSNPtifunc_cdshet
98.3229
97.6129
99.0434
32.3272
830120382838049
61.2500
anovak-vgSNPtifunc_cdshetalt
0.0000
37.5000
0.0000
0.0000
35000
anovak-vgSNPtifunc_cdshomalt
99.1630
98.9384
99.3887
18.9378
52195652033230
93.7500
anovak-vgSNPtvfunc_cds*
98.2741
97.7580
98.7957
36.4158
42739842665232
61.5385
anovak-vgSNPtvfunc_cdshet
97.9570
97.3654
98.5557
42.0612
25877025933821
55.2632
anovak-vgSNPtvfunc_cdshetalt
0.0000
30.0000
0.0000
0.0000
37000
anovak-vgSNPtvfunc_cdshomalt
98.9685
98.7676
99.1701
25.0222
16832116731411
78.5714