PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
4001-4050 / 86044 show all
bgallagher-sentieonINDELD16_PLUSfunc_cds*
100.0000
100.0000
100.0000
79.6610
1201200
bgallagher-sentieonINDELD16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
81.8182
80800
bgallagher-sentieonINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
73.3333
40400
bgallagher-sentieonINDELD1_5func_cds*
100.0000
100.0000
100.0000
40.7407
159016000
bgallagher-sentieonINDELD1_5func_cdshet
100.0000
100.0000
100.0000
46.5839
8508600
bgallagher-sentieonINDELD1_5func_cdshetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
31.4815
7407400
bgallagher-sentieonINDELC1_5func_cds*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5func_cdshet
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC1_5func_cdshomalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5func_cds*
0.0000
0.0000
100.0000
95.4545
00100
cchapple-customINDELC1_5func_cdshet
0.0000
100.0000
00000
cchapple-customINDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC1_5func_cdshomalt
0.0000
0.0000
100.0000
90.0000
00100
cchapple-customINDELC6_15func_cds*
0.0000
100.0000
00000
cchapple-customINDELC6_15func_cdshet
0.0000
100.0000
00000
cchapple-customINDELC6_15func_cdshetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC6_15func_cdshomalt
0.0000
100.0000
00000
cchapple-customINDEL*func_cds*
98.9926
98.8764
99.1091
40.8432
440544542
50.0000
cchapple-customINDEL*func_cdshet
98.6264
98.5981
98.6547
47.0309
211322031
33.3333
cchapple-customINDEL*func_cdshetalt
0.0000
80.0000
0.0000
0.0000
41000
cchapple-customINDEL*func_cdshomalt
99.5575
99.5575
99.5575
33.1361
225122511
100.0000
cchapple-customINDELC16_PLUSfunc_cds*
0.0000
100.0000
00000
cchapple-customINDELC16_PLUSfunc_cdshet
0.0000
100.0000
00000
cchapple-customINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELC16_PLUSfunc_cdshomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI6_15func_cds*
97.6744
97.6744
97.6744
38.5714
4214211
100.0000
bgallagher-sentieonINDELI6_15func_cdshet
100.0000
100.0000
100.0000
38.4615
2402400
bgallagher-sentieonINDELI6_15func_cdshetalt
85.7143
75.0000
100.0000
25.0000
31300
bgallagher-sentieonINDELI6_15func_cdshomalt
96.7742
100.0000
93.7500
40.7407
1501511
100.0000
bgallagher-sentieonSNPtifunc_cds*
99.9094
99.9565
99.8623
22.5049
13781613779190
0.0000
bgallagher-sentieonSNPtifunc_cdshet
99.8707
99.9647
99.7769
24.1158
850138499190
0.0000
bgallagher-sentieonSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
46.6667
80800
bgallagher-sentieonSNPtifunc_cdshomalt
99.9716
99.9431
100.0000
19.6954
52723527200
bgallagher-sentieonSNPtvfunc_cds*
99.8287
100.0000
99.6579
29.0453
437104370150
0.0000
bgallagher-sentieonSNPtvfunc_cdshet
99.7184
100.0000
99.4384
31.4601
265702656150
0.0000
bgallagher-sentieonSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
56.5217
1001000
bgallagher-sentieonSNPtvfunc_cdshomalt
100.0000
100.0000
100.0000
24.6018
17040170400
bgallagher-sentieonSNP*func_cds*
99.8899
99.9669
99.8129
24.1761
18144618141340
0.0000
bgallagher-sentieonSNP*func_cdshet
99.8344
99.9731
99.6961
26.0085
11158311155340
0.0000
bgallagher-sentieonSNP*func_cdshetalt
100.0000
100.0000
100.0000
56.5217
1001000
bgallagher-sentieonSNP*func_cdshomalt
99.9785
99.9570
100.0000
20.9518
69763697600
asubramanian-gatkSNPtvfunc_cds*
99.5422
99.4967
99.5877
36.6971
4349224348180
0.0000
asubramanian-gatkSNPtvfunc_cdshet
99.4171
99.5107
99.3236
42.1899
2644132643180
0.0000
asubramanian-gatkSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
58.3333
1001000
asubramanian-gatkSNPtvfunc_cdshomalt
99.7352
99.4718
100.0000
25.3304
16959169500
bgallagher-sentieonINDEL*func_cds*
99.5531
99.7753
99.3318
44.7724
444144631
33.3333
bgallagher-sentieonINDEL*func_cdshet
99.5392
100.0000
99.0826
49.7696
214021620
0.0000