PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
40201-40250 / 86044 show all | |||||||||||||||
| egarrison-hhga | INDEL | C6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| egarrison-hhga | INDEL | C6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| egarrison-hhga | INDEL | C6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| egarrison-hhga | INDEL | C6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| egarrison-hhga | INDEL | C16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| egarrison-hhga | INDEL | C16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| egarrison-hhga | INDEL | C16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| egarrison-hhga | INDEL | C16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| eyeh-varpipe | INDEL | I1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 91.2621 | 100.0000 | 83.9286 | 99.8242 | 1 | 0 | 141 | 27 | 26 | 96.2963 | |
| eyeh-varpipe | INDEL | I1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 0.0000 | 86.4865 | 99.7553 | 0 | 0 | 96 | 15 | 15 | 100.0000 | |
| eyeh-varpipe | INDEL | I1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 100.0000 | 100.0000 | 100.0000 | 99.7735 | 1 | 0 | 17 | 0 | 0 | ||
| eyeh-varpipe | INDEL | I1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 0.0000 | 70.0000 | 99.9063 | 0 | 0 | 28 | 12 | 11 | 91.6667 | |
| eyeh-varpipe | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 0.0000 | 66.6667 | 98.7791 | 0 | 2 | 14 | 7 | 7 | 100.0000 | |
| eyeh-varpipe | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 0.0000 | 75.0000 | 98.7441 | 0 | 0 | 6 | 2 | 2 | 100.0000 | |
| eyeh-varpipe | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 0.0000 | 100.0000 | 97.2973 | 0 | 2 | 5 | 0 | 0 | ||
| eyeh-varpipe | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 0.0000 | 37.5000 | 99.1091 | 0 | 0 | 3 | 5 | 5 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 0.0000 | 33.3333 | 94.7368 | 0 | 0 | 1 | 2 | 2 | 100.0000 | |
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 0.0000 | 100.0000 | 96.4286 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| eyeh-varpipe | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 0.0000 | 90.4762 | 0 | 0 | 0 | 2 | 2 | 100.0000 | ||
| eyeh-varpipe | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 0.0000 | 80.9524 | 99.7647 | 0 | 0 | 17 | 4 | 3 | 75.0000 | |
| eyeh-varpipe | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 0.0000 | 75.0000 | 99.7623 | 0 | 0 | 6 | 2 | 1 | 50.0000 | |
| eyeh-varpipe | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 0.0000 | 100.0000 | 99.6549 | 0 | 0 | 8 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 0.0000 | 60.0000 | 99.8457 | 0 | 0 | 3 | 2 | 2 | 100.0000 | |
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 59.1341 | 47.0588 | 79.5455 | 96.0644 | 32 | 36 | 35 | 9 | 9 | 100.0000 | |
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 58.5774 | 45.4545 | 82.3529 | 96.9203 | 20 | 24 | 14 | 3 | 3 | 100.0000 | |
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 50.0000 | 33.3333 | 100.0000 | 87.8049 | 3 | 6 | 10 | 0 | 0 | ||
| eyeh-varpipe | INDEL | D16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 62.2642 | 60.0000 | 64.7059 | 96.4876 | 9 | 6 | 11 | 6 | 6 | 100.0000 | |
| eyeh-varpipe | INDEL | D1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 0.0000 | 94.5833 | 99.7919 | 0 | 1 | 227 | 13 | 12 | 92.3077 | |
| eyeh-varpipe | INDEL | D1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 0.0000 | 98.2249 | 99.6798 | 0 | 0 | 166 | 3 | 2 | 66.6667 | |
| eyeh-varpipe | INDEL | D1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 0.0000 | 88.8889 | 99.7402 | 0 | 1 | 24 | 3 | 3 | 100.0000 | |
| eyeh-varpipe | INDEL | D1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 0.0000 | 84.0909 | 99.9156 | 0 | 0 | 37 | 7 | 7 | 100.0000 | |
| eyeh-varpipe | INDEL | D6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 70.3015 | 64.9123 | 76.6667 | 98.8432 | 37 | 20 | 69 | 21 | 16 | 76.1905 | |
| eyeh-varpipe | INDEL | D6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 75.6646 | 71.4286 | 80.4348 | 98.6240 | 30 | 12 | 37 | 9 | 7 | 77.7778 | |
| eyeh-varpipe | INDEL | D6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 58.8235 | 44.4444 | 86.9565 | 97.3714 | 4 | 5 | 20 | 3 | 3 | 100.0000 | |
| eyeh-varpipe | INDEL | D6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 53.3333 | 50.0000 | 57.1429 | 99.4104 | 3 | 3 | 12 | 9 | 6 | 66.6667 | |
| eyeh-varpipe | INDEL | C6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 100.0000 | 100.0000 | 100.0000 | 99.6089 | 1 | 0 | 3 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 100.0000 | 100.0000 | 100.0000 | 99.3080 | 1 | 0 | 2 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 0.0000 | 100.0000 | 99.4083 | 0 | 0 | 1 | 0 | 0 | ||
| eyeh-varpipe | INDEL | C6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-vqsr | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-vqsr | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-vqsr | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-vqsr | INDEL | I16_PLUS | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-vqsr | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-vqsr | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-vqsr | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-vqsr | INDEL | C1_5 | lowcmp_SimpleRepeat_homopolymer_gt10 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-vqsr | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | * | 100.0000 | 100.0000 | 100.0000 | 99.8656 | 2 | 0 | 2 | 0 | 0 | ||
| ckim-vqsr | INDEL | I6_15 | lowcmp_SimpleRepeat_homopolymer_gt10 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||