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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
39451-39500 / 86044 show all
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
2.2727
0.0000
0.0000
143000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
75.6674
63.2653
94.1176
81.0056
31183222
100.0000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
67.0927
72.4138
62.5000
88.2086
6324653920
51.2821
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
72.5832
98.0769
57.6087
86.0395
511533920
51.2821
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
012000
ghariani-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
68.5714
52.1739
100.0000
94.6188
12111200
ghariani-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_6to10*
98.8700
99.7128
98.0414
48.3490
625018625712513
10.4000
ghariani-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_6to10het
98.7332
99.6556
97.8277
50.1744
4051144053900
0.0000
ghariani-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_6to10homalt
99.1675
99.9091
98.4368
44.5929
2199222043513
37.1429
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10*
88.0685
85.1768
91.1634
69.1509
22643942249218103
47.2477
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10het
94.5086
98.3261
90.9764
72.8370
135123135113468
50.7463
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
1.2658
0.0000
0.0000
4312000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
92.6592
93.9050
91.4460
61.1858
909598988435
41.6667
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10*
97.1108
97.1608
97.0609
55.5769
2463972024636746544
72.9223
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10het
98.0582
99.4990
96.6586
57.2289
146967414695508335
65.9449
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.9732
0.0000
0.0000
4407000
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
97.6568
97.6518
97.6619
52.8575
99392399941238209
87.8151
ghariani-varprowlSNP*lowcmp_SimpleRepeat_homopolymer_6to10*
98.4684
99.6391
97.3249
58.7610
17115621713647162
13.1635
ghariani-varprowlSNP*lowcmp_SimpleRepeat_homopolymer_6to10het
98.2430
99.5309
96.9881
59.7341
1103252110453433
0.8746
ghariani-varprowlSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
05000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_homopolymer_6to10homalt
98.9200
99.9179
97.9418
56.8515
60835609112859
46.0938
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10*
81.0304
79.3233
82.8125
82.8188
211552124439
88.6364
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
87.8646
98.7097
79.1667
84.0000
15321524037
92.5000
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
037000
ghariani-varprowlINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
85.3778
78.3784
93.7500
77.9310
58166042
50.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
39.0244
34.0426
45.7143
78.5276
1631161918
94.7368
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
58.1470
86.6667
43.7500
77.4648
132141817
94.4444
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
3.5714
0.0000
0.0000
127000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
57.1429
50.0000
66.6667
85.7143
22211
100.0000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
0.0000
0.0000
0.0000
087000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
0.0000
0.0000
0.0000
052000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
012000
gduggal-snapplatINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
0.0000
0.0000
023000
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_homopolymer_6to10*
99.2467
99.6334
98.8630
62.3274
10871401086912524
19.2000
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_homopolymer_6to10het
99.1501
99.7008
98.6054
62.2072
69982170009915
15.1515
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_homopolymer_6to10hetalt
83.3333
100.0000
71.4286
70.8333
50520
0.0000
gduggal-snapfbSNPtvlowcmp_SimpleRepeat_homopolymer_6to10homalt
99.4469
99.5112
99.3827
62.5253
3868193864249
37.5000
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10*
39.6010
27.0677
73.7500
90.5101
7219459214
19.0476
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
33.1361
22.5806
62.2222
91.9210
3512028171
5.8824
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
34.0426
21.6216
80.0000
86.6667
829822
100.0000
gduggal-snapplatINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
54.9650
39.1892
92.0000
88.1517
29452321
50.0000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10*
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10het
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_homopolymer_6to10*
90.7450
84.0340
98.6211
62.7612
2374845122381633353
15.9159
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_homopolymer_6to10het
90.2475
83.3770
98.3520
63.7948
1369827311372623021
9.1304
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
65.3917
49.9065
94.8097
85.3076
2672682741510
66.6667
gduggal-snapplatINDEL*lowcmp_SimpleRepeat_homopolymer_6to10homalt
92.4376
86.6059
99.1115
59.3014
9783151398168822
25.0000