PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
3901-3950 / 86044 show all
ndellapenna-hhgaSNPtifunc_cds*
99.9384
99.9565
99.9202
22.0527
13781613781110
0.0000
ndellapenna-hhgaSNPtifunc_cdshet
99.9118
99.9530
99.8708
22.7256
850048500110
0.0000
ndellapenna-hhgaSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
57.8947
80800
ndellapenna-hhgaSNPtifunc_cdshomalt
99.9810
99.9621
100.0000
20.8377
52732527300
ndellapenna-hhgaSNPtvfunc_cds*
99.9314
99.9771
99.8857
28.0901
43701437050
0.0000
ndellapenna-hhgaSNPtvfunc_cdshet
99.8872
99.9624
99.8121
28.8312
26561265650
0.0000
ndellapenna-hhgaSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
60.0000
1001000
ndellapenna-hhgaSNPtvfunc_cdshomalt
100.0000
100.0000
100.0000
26.5517
17040170400
qzeng-customINDELC16_PLUSfunc_cds*
0.0000
0.0000
60.0000
00040
0.0000
qzeng-customINDELC16_PLUSfunc_cdshet
0.0000
0.0000
83.3333
00010
0.0000
qzeng-customINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
25.0000
00030
0.0000
qzeng-customINDELC1_5func_cds*
0.0000
100.0000
00000
qzeng-customINDELC1_5func_cdshet
0.0000
100.0000
00000
qzeng-customINDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5func_cdshomalt
0.0000
100.0000
00000
qzeng-customINDEL*func_cds*
95.4248
98.4270
92.6004
43.9573
4387438354
11.4286
qzeng-customINDEL*func_cdshet
93.8897
98.1308
90.0000
52.8689
2104207232
8.6957
qzeng-customINDEL*func_cdshetalt
75.0000
60.0000
100.0000
33.3333
32200
qzeng-customINDEL*func_cdshomalt
97.2362
99.5575
95.0207
31.7280
2251229122
16.6667
qzeng-customSNPtvfunc_cds*
99.6678
99.6797
99.6560
35.7311
4357144345150
0.0000
qzeng-customSNPtvfunc_cdshet
99.5488
99.6613
99.4365
40.8444
264892647150
0.0000
qzeng-customSNPtvfunc_cdshetalt
100.0000
100.0000
100.0000
54.5455
1001000
qzeng-customSNPtvfunc_cdshomalt
99.8531
99.7066
100.0000
25.3758
16995168800
raldana-dualsentieonINDEL*func_cds*
99.2118
98.8764
99.5495
41.6557
440544220
0.0000
raldana-dualsentieonINDEL*func_cdshet
98.5959
98.1308
99.0654
45.9596
210421220
0.0000
raldana-dualsentieonINDEL*func_cdshetalt
88.8889
80.0000
100.0000
60.0000
41400
raldana-dualsentieonINDEL*func_cdshomalt
100.0000
100.0000
100.0000
36.3380
226022600
qzeng-customSNPtifunc_cds*
99.7894
99.8622
99.7168
26.7032
137681913732394
10.2564
qzeng-customSNPtifunc_cdshet
99.7296
99.8589
99.6007
30.7386
8492128481341
2.9412
qzeng-customSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
46.6667
80800
qzeng-customSNPtifunc_cdshomalt
99.8860
99.8673
99.9047
18.9998
52687524353
60.0000
qzeng-customINDELD6_15func_cds*
85.9267
90.6977
81.6327
50.0000
3944091
11.1111
qzeng-customINDELD6_15func_cdshet
85.5576
89.6552
81.8182
50.0000
2632760
0.0000
qzeng-customINDELD6_15func_cdshetalt
0.0000
50.0000
0.0000
0.0000
11000
qzeng-customINDELD6_15func_cdshomalt
89.6552
100.0000
81.2500
50.0000
1201331
33.3333
qzeng-customINDELI6_15func_cds*
79.2079
93.0233
68.9655
30.1205
40340183
16.6667
qzeng-customINDELI6_15func_cdshet
77.4194
100.0000
63.1579
33.3333
24024142
14.2857
qzeng-customINDELI6_15func_cdshetalt
66.6667
50.0000
100.0000
0.0000
22200
qzeng-customINDELI6_15func_cdshomalt
84.8485
93.3333
77.7778
25.0000
1411441
25.0000
qzeng-customSNP*func_cds*
99.7598
99.8182
99.7016
28.7413
181173318040544
7.4074
qzeng-customSNP*func_cdshet
99.6863
99.8118
99.5610
32.9992
111402111112491
2.0408
qzeng-customSNP*func_cdshetalt
100.0000
100.0000
100.0000
54.5455
1001000
qzeng-customSNP*func_cdshomalt
99.8779
99.8281
99.9278
20.5349
696712691853
60.0000
qzeng-customINDELI16_PLUSfunc_cds*
77.1930
91.6667
66.6667
67.3913
1111050
0.0000
qzeng-customINDELI16_PLUSfunc_cdshet
88.8889
100.0000
80.0000
61.5385
90820
0.0000
qzeng-customINDELI16_PLUSfunc_cdshetalt
0.0000
100.0000
01000
qzeng-customINDELI16_PLUSfunc_cdshomalt
57.1429
100.0000
40.0000
73.6842
20230
0.0000
qzeng-customINDELI1_5func_cds*
99.1720
99.4444
98.9011
34.7670
179118020
0.0000
qzeng-customINDELI1_5func_cdshet
97.4503
98.3051
96.6102
48.2456
5815720
0.0000