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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 701 702 703 704 705 706 707 708 709 ... 1720 1721 » 35201-35250 / 86044 show all
ckim-vqsr	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	*	98.5918	98.4368	98.7473	52.7193	36020	572	35944	456	425	93.2018
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	het	98.9340	99.3274	98.5437	62.8374	15654	106	15496	229	203	88.6463
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.5627	95.6563	99.5467	33.3070	10020	455	10102	46	45	97.8261
dgrover-gatk	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.0806	99.8938	98.2806	45.8961	10346	11	10346	181	177	97.7901
dgrover-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	*	99.7826	99.6279	99.9378	69.6768	4819	18	4819	3	3	100.0000
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	het	99.7614	99.6188	99.9044	71.9607	3136	12	3136	3	3	100.0000
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	hetalt	100.0000	100.0000	100.0000	95.0000	1	0	1	0	0
ckim-vqsr	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.8220	99.6445	100.0000	64.1135	1682	6	1682	0	0
ckim-vqsr	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	*	99.6806	99.6087	99.7525	66.7490	4837	19	4837	12	10	83.3333
ckim-vqsr	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	het	99.6600	99.6762	99.6439	69.2790	3078	10	3078	11	9	81.8182
ckim-vqsr	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	hetalt	100.0000	100.0000	100.0000	95.8333	1	0	1	0	0
ckim-vqsr	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.7164	99.4907	99.9431	60.9458	1758	9	1758	1	1	100.0000
dgrover-gatk	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C6_15	lowcmp_SimpleRepeat_diTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	*	97.9103	98.0469	97.7741	69.5010	1757	35	1757	40	30	75.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	het	97.0995	99.3432	94.9550	83.9270	605	4	527	28	20	71.4286
dgrover-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.8851	96.3010	99.5221	33.9384	755	29	833	4	4	100.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt	98.7562	99.4987	98.0247	65.4437	397	2	397	8	6	75.0000
dgrover-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	C1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	*	99.7314	99.6182	99.8449	68.2587	9655	37	9655	15	13	86.6667
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	het	99.7112	99.6472	99.7752	70.6918	6214	22	6214	14	12	85.7143
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	100.0000	100.0000	100.0000	95.8333	1	0	1	0	0
ckim-vqsr	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.7680	99.5658	99.9709	62.5612	3440	15	3440	1	1	100.0000
egarrison-hhga	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	*	98.3647	97.6018	99.1396	66.6853	4721	116	4724	41	16	39.0244
egarrison-hhga	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	het	98.1544	97.1410	99.1891	68.9245	3058	90	3058	25	8	32.0000
egarrison-hhga	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	hetalt	100.0000	100.0000	100.0000	90.9091	1	0	1	0	0
egarrison-hhga	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	homalt	98.7531	98.4597	99.0482	61.5420	1662	26	1665	16	8	50.0000
egarrison-hhga	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	*	93.8372	90.5887	97.3274	60.9904	2185	227	2185	60	44	73.3333
egarrison-hhga	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	het	94.0938	92.8279	95.3947	79.6156	453	35	435	21	12	57.1429
egarrison-hhga	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	94.0960	89.8927	98.7117	42.9671	1592	179	1609	21	20	95.2381
egarrison-hhga	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	homalt	90.0691	91.5033	88.6792	75.9091	140	13	141	18	12	66.6667
egarrison-hhga	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	*	98.6351	98.0293	99.2485	64.1671	9501	191	9509	72	32	44.4444
egarrison-hhga	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	het	98.4322	97.6427	99.2345	66.5194	6089	147	6093	47	18	38.2979
egarrison-hhga	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	100.0000	100.0000	100.0000	95.0000	1	0	1	0	0
egarrison-hhga	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	homalt	98.9991	98.7265	99.2733	58.9450	3411	44	3415	25	14	56.0000
eyeh-varpipe	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	*	79.8081	77.9624	81.7434	39.7623	28528	8064	48773	10893	10778	98.9443
eyeh-varpipe	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	het	92.5067	90.7170	94.3684	38.1735	14297	1463	25772	1538	1472	95.7087

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