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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
33851-33900 / 86044 show all
gduggal-snapplatINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
61.5928
47.2536
88.4257
46.3421
179820071803236207
87.7119
gduggal-snapplatINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
55.0640
44.6809
71.7340
85.7770
25231230211938
31.9328
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_11to50*
49.9128
37.3964
75.0227
61.0403
902151082627549
17.8182
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_11to50het
19.2946
18.8525
19.7581
78.5095
92396491995
2.5126
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
60.1656
43.9300
95.4373
42.4088
7789937533629
80.5556
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
26.8531
20.9150
37.5000
78.8079
32121244015
37.5000
gduggal-snapplatSNP*lowcmp_SimpleRepeat_diTR_11to50*
79.9070
76.3413
83.8220
85.1082
7399229374611440187
12.9861
gduggal-snapvardINDEL*lowcmp_SimpleRepeat_diTR_11to50*
65.2231
63.7325
66.7851
42.6875
2332113271407732027818291
90.2012
gduggal-snapvardINDEL*lowcmp_SimpleRepeat_diTR_11to50het
73.0691
85.1079
64.0141
42.9883
134132347356932006518085
90.1321
gduggal-snapvardINDEL*lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
58.7303
0.0000
0.0000
61524323000
gduggal-snapvardINDEL*lowcmp_SimpleRepeat_diTR_11to50homalt
52.6401
36.2653
95.9758
39.3144
375666015080213206
96.7136
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
14.2857
87.0370
00161
16.6667
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
14.2857
86.2745
00161
16.6667
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
100.0000
00000
gduggal-snapplatSNPtvlowcmp_SimpleRepeat_diTR_11to50*
79.1231
74.0733
84.9119
84.9242
35971259361364294
14.6417
gduggal-snapplatSNPtvlowcmp_SimpleRepeat_diTR_11to50het
75.8773
72.5712
79.4989
87.1649
2241847225358159
10.1549
gduggal-snapplatSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
96.6667
01011
100.0000
gduggal-snapplatSNPtvlowcmp_SimpleRepeat_diTR_11to50homalt
85.2074
76.7402
95.7746
76.7746
135641113606034
56.6667
gduggal-snapplatINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
0.0000
0480000
gduggal-snapplatINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
0.0000
0160000
gduggal-snapplatINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
0279000
gduggal-snapplatINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
0.0000
041000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_diTR_11to50*
70.9708
71.4018
70.5450
38.3153
1752270182227693018410
90.4204
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_diTR_11to50het
78.0403
92.7260
67.3704
39.0451
96507571892391658275
90.2891
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
66.8748
0.0000
0.0000
46052281000
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_diTR_11to50homalt
61.3722
45.0807
96.1020
31.7355
326739803353136135
99.2647
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
47.2362
89.5263
009410543
40.9524
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
46.0317
89.0815
008710240
39.2157
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC6_15lowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
70.0000
94.0828
00733
100.0000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
2.6388
1.3951
24.3243
79.2910
251767278448
57.1429
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
4.6990
2.6273
22.2222
79.1506
16593248448
57.1429
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.7653
0.0000
0.0000
6778000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
1.4925
0.7519
100.0000
83.3333
3396300
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
1.2251
0.6250
30.7692
75.3555
3477163611
30.5556
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
3.5346
1.8750
30.7692
75.2381
3157163611
30.5556
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
0279000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
100.0000
041000
gduggal-snapvardINDELI1_5lowcmp_SimpleRepeat_diTR_11to50*
68.0107
68.2833
67.7403
40.7190
391418181093652084870
93.5100
gduggal-snapvardINDELI1_5lowcmp_SimpleRepeat_diTR_11to50het
75.4653
90.5356
64.6962
41.2162
1234129945651604823
93.4690
gduggal-snapvardINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
62.8647
0.0000
0.0000
23921413000
gduggal-snapvardINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
66.8725
51.0638
96.8586
35.5002
28827614804847
97.9167
gduggal-snapvardINDELI6_15lowcmp_SimpleRepeat_diTR_11to50*
44.3676
44.4859
44.2500
32.4739
10731339194724532342
95.4749
gduggal-snapvardINDELI6_15lowcmp_SimpleRepeat_diTR_11to50het
54.2480
71.5164
43.6969
32.3548
349139190324522341
95.4731
gduggal-snapvardINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
40.2597
0.0000
0.0000
7131058000
gduggal-snapvardINDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
13.3942
7.1895
97.7778
42.3077
111424411
100.0000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_11to50*
59.9212
54.8636
66.0058
31.4666
51894269519426752487
92.9720
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_11to50het
71.5901
79.0706
65.4026
31.3787
2161572503626642476
92.9429
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
59.5348
0.0000
0.0000
28411931000