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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
33651-33700 / 86044 show all
cchapple-customSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customSNPtilowcmp_SimpleRepeat_diTR_11to50homalt
99.4642
99.1114
99.8195
47.8833
167315165933
100.0000
cchapple-customSNPtvlowcmp_SimpleRepeat_diTR_11to50*
99.4664
99.3822
99.5507
61.1367
48263048742210
45.4545
cchapple-customSNPtvlowcmp_SimpleRepeat_diTR_11to50het
99.3270
99.3199
99.3340
66.8350
3067213132219
42.8571
cchapple-customSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customSNPtvlowcmp_SimpleRepeat_diTR_11to50homalt
99.7161
99.4907
99.9426
43.6105
17589174211
100.0000
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_11to50*
78.8703
94.8102
67.5188
69.4075
918950393504498362
8.0480
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_11to50het
73.8977
92.7678
61.4068
68.2562
578545159193720112
3.0108
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
65.2174
01082
25.0000
ciseli-customSNP*lowcmp_SimpleRepeat_diTR_11to50homalt
89.3094
98.5239
81.6710
71.7637
3404513431770248
32.2078
ciseli-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
32.8326
22.5000
60.7143
91.1532
36124342212
54.5455
ciseli-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
0279000
ciseli-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
34.7826
48.7805
27.0270
82.1256
2021205449
90.7407
ciseli-customINDELI1_5lowcmp_SimpleRepeat_diTR_11to50*
45.4191
32.4145
75.8496
67.6203
185838741674533342
64.1651
ciseli-customINDELI1_5lowcmp_SimpleRepeat_diTR_11to50het
83.6651
85.4732
81.9319
70.4517
11651981179260119
45.7692
ciseli-customINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
5.2037
0.0000
0.0000
1983607000
ciseli-customINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
74.3243
87.7660
64.4531
60.5344
49569495273223
81.6850
ciseli-customINDELI6_15lowcmp_SimpleRepeat_diTR_11to50*
19.2271
11.7330
53.2189
75.6912
2832129248218182
83.4862
ciseli-customINDELI6_15lowcmp_SimpleRepeat_diTR_11to50het
45.6848
32.5820
76.4151
81.0545
1593291625035
70.0000
ciseli-customINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
2.0892
0.0000
0.0000
371734000
ciseli-customINDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
42.4438
56.8627
33.8583
68.1704
876686168147
87.5000
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_11to50*
81.1779
95.3254
70.6870
69.0825
462922746711937164
8.4667
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_11to50het
76.8078
93.2966
65.2719
67.9320
28812072917155248
3.0928
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
65.2174
01082
25.0000
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_11to50homalt
89.8551
98.9247
82.3088
71.2571
1748191754377114
30.2387
ckim-dragenINDEL*lowcmp_SimpleRepeat_diTR_11to50*
98.1771
97.9914
98.3635
52.4340
3585773535764595553
92.9412
ckim-dragenINDEL*lowcmp_SimpleRepeat_diTR_11to50het
99.2504
99.2513
99.2495
62.6333
156421181547211778
66.6667
ckim-dragenINDEL*lowcmp_SimpleRepeat_diTR_11to50hetalt
96.9002
94.3962
99.5408
32.4909
988858799714646
100.0000
ckim-dragenINDEL*lowcmp_SimpleRepeat_diTR_11to50homalt
97.8109
99.7103
95.9825
45.9159
103273010321432429
99.3056
ciseli-customSNPtilowcmp_SimpleRepeat_diTR_11to50*
76.6099
94.2733
64.5210
69.8327
456027747012585206
7.9691
ciseli-customSNPtilowcmp_SimpleRepeat_diTR_11to50het
71.2738
92.2490
58.0701
68.6719
29042443015217768
3.1236
ciseli-customSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
66.6667
01052
40.0000
ciseli-customSNPtilowcmp_SimpleRepeat_diTR_11to50homalt
88.5602
98.1043
80.7085
72.3823
1656321686403136
33.7469
ciseli-customINDELD6_15lowcmp_SimpleRepeat_diTR_11to50*
44.0541
41.4041
47.0666
44.8610
39165542393944303649
82.3702
ciseli-customINDELD6_15lowcmp_SimpleRepeat_diTR_11to50het
66.9020
71.8258
62.6099
52.3713
196377022071318760
57.6631
ciseli-customINDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
4.4216
0.0000
0.0000
2114561000
ciseli-customINDELD6_15lowcmp_SimpleRepeat_diTR_11to50homalt
51.0479
89.1961
35.7556
37.7138
1742211173231122889
92.8342
ciseli-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
18.2169
11.6667
41.5385
87.5836
56424547661
80.2632
ckim-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
94.9718
91.0394
99.2593
62.7586
2542526822
100.0000
ckim-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
91.9540
97.5610
86.9565
88.1748
4014066
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_11to50*
97.3823
95.0803
99.7986
57.9620
54502825451119
81.8182
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_11to50het
99.4085
99.1930
99.6249
78.2367
135211132853
60.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
96.2944
92.8778
99.9719
25.4138
3534271355911
100.0000
ckim-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
99.5587
100.0000
99.1213
72.8401
564056455
100.0000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_11to50*
98.6306
98.1744
99.0911
41.2071
2409244824094221211
95.4751
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_11to50het
99.3332
99.5580
99.1095
50.6288
1036146103509384
90.3226
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
96.8242
94.2928
99.4953
23.7079
649339365063333
100.0000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_diTR_11to50homalt
99.2867
99.8758
98.7045
36.9692
7238972389594
98.9474
ckim-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_11to50*
97.8013
97.5893
98.0142
45.3295
92302289230187180
96.2567
ckim-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_11to50het
97.9553
99.4146
96.5382
63.5394
27171627059791
93.8144