PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
33601-33650 / 86044 show all | |||||||||||||||
| ckim-dragen | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_11to50 | * | 0.0000 | 0.0000 | 100.0000 | 93.3333 | 0 | 0 | 1 | 0 | 0 | ||
| ckim-dragen | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_11to50 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 0.0000 | 100.0000 | 93.3333 | 0 | 0 | 1 | 0 | 0 | ||
| ckim-dragen | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | * | 97.3289 | 97.6004 | 97.0588 | 69.9817 | 1749 | 43 | 1749 | 53 | 38 | 71.6981 | |
| ckim-dragen | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | het | 97.3643 | 99.3432 | 95.4628 | 84.4394 | 605 | 4 | 526 | 25 | 10 | 40.0000 | |
| ckim-dragen | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 97.2959 | 95.2806 | 99.3983 | 32.5487 | 747 | 37 | 826 | 5 | 5 | 100.0000 | |
| ckim-dragen | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 96.9475 | 99.4987 | 94.5238 | 65.8537 | 397 | 2 | 397 | 23 | 23 | 100.0000 | |
| ckim-dragen | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | * | 96.1175 | 95.4167 | 96.8288 | 81.8217 | 458 | 22 | 458 | 15 | 12 | 80.0000 | |
| ckim-dragen | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | het | 97.7221 | 97.5000 | 97.9452 | 89.4888 | 156 | 4 | 143 | 3 | 1 | 33.3333 | |
| ckim-dragen | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 96.5177 | 93.9068 | 99.2780 | 66.5459 | 262 | 17 | 275 | 2 | 2 | 100.0000 | |
| ckim-dragen | INDEL | I16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 87.9121 | 97.5610 | 80.0000 | 87.0130 | 40 | 1 | 40 | 10 | 9 | 90.0000 | |
| ckim-dragen | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_11to50 | * | 97.7960 | 96.0049 | 99.6553 | 58.3497 | 5503 | 229 | 5493 | 19 | 12 | 63.1579 | |
| ckim-dragen | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_11to50 | het | 99.1853 | 99.0462 | 99.3248 | 77.9742 | 1350 | 13 | 1324 | 9 | 2 | 22.2222 | |
| ckim-dragen | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 97.0656 | 94.3233 | 99.9723 | 28.7295 | 3589 | 216 | 3606 | 1 | 1 | 100.0000 | |
| ckim-dragen | INDEL | I1_5 | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 99.2070 | 100.0000 | 98.4266 | 73.0316 | 564 | 0 | 563 | 9 | 9 | 100.0000 | |
| ckim-dragen | INDEL | D6_15 | lowcmp_SimpleRepeat_diTR_11to50 | * | 97.2724 | 97.0924 | 97.4530 | 45.0586 | 9183 | 275 | 9183 | 240 | 235 | 97.9167 | |
| ckim-dragen | INDEL | D6_15 | lowcmp_SimpleRepeat_diTR_11to50 | het | 99.1036 | 99.3780 | 98.8308 | 63.1331 | 2716 | 17 | 2705 | 32 | 28 | 87.5000 | |
| ckim-dragen | INDEL | D6_15 | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 97.0497 | 94.7611 | 99.4516 | 24.8186 | 4522 | 250 | 4534 | 25 | 25 | 100.0000 | |
| ckim-dragen | INDEL | D6_15 | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 95.3176 | 99.5904 | 91.3963 | 41.9328 | 1945 | 8 | 1944 | 183 | 182 | 99.4536 | |
| ckim-dragen | INDEL | C16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | * | 0.0000 | 0.0000 | 100.0000 | 66.6667 | 0 | 0 | 1 | 0 | 0 | ||
| ckim-dragen | INDEL | C16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | C16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 0.0000 | 100.0000 | 66.6667 | 0 | 0 | 1 | 0 | 0 | ||
| ckim-dragen | INDEL | C16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_diTR_11to50 | * | 0.0000 | 0.0000 | 24.7826 | 93.8272 | 0 | 0 | 57 | 173 | 47 | 27.1676 | |
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_diTR_11to50 | het | 0.0000 | 0.0000 | 72.7273 | 97.1354 | 0 | 0 | 24 | 9 | 2 | 22.2222 | |
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C1_5 | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 0.0000 | 0.0000 | 16.7513 | 92.3465 | 0 | 0 | 33 | 164 | 45 | 27.4390 | |
| ciseli-custom | INDEL | * | lowcmp_SimpleRepeat_diTR_11to50 | * | 61.6156 | 61.1636 | 62.0744 | 51.1512 | 22381 | 14211 | 22533 | 13767 | 10331 | 75.0418 | |
| ciseli-custom | INDEL | * | lowcmp_SimpleRepeat_diTR_11to50 | het | 76.1186 | 81.3959 | 71.4838 | 54.5214 | 12828 | 2932 | 13489 | 5381 | 2743 | 50.9757 | |
| ciseli-custom | INDEL | * | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 4.5442 | 0.0000 | 0.0000 | 476 | 9999 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | * | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 65.1835 | 87.6412 | 51.8876 | 46.8905 | 9077 | 1280 | 9044 | 8386 | 7588 | 90.4841 | |
| ciseli-custom | INDEL | C16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | * | 0.0000 | 0.0000 | 26.6667 | 96.0212 | 0 | 0 | 4 | 11 | 6 | 54.5455 | |
| ciseli-custom | INDEL | C16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | het | 0.0000 | 0.0000 | 98.7500 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| ciseli-custom | INDEL | C16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 0.0000 | 0.0000 | 28.5714 | 95.2862 | 0 | 0 | 4 | 10 | 6 | 60.0000 | |
| ciseli-custom | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | * | 41.0817 | 36.4955 | 46.9862 | 60.8362 | 654 | 1138 | 647 | 730 | 671 | 91.9178 | |
| ciseli-custom | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | het | 53.5743 | 43.1856 | 70.5446 | 64.5614 | 263 | 346 | 285 | 119 | 105 | 88.2353 | |
| ciseli-custom | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 3.1888 | 0.0000 | 0.0000 | 25 | 759 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | D16_PLUS | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 52.9379 | 91.7293 | 37.2045 | 59.0488 | 366 | 33 | 362 | 611 | 566 | 92.6350 | |
| ciseli-custom | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_11to50 | * | 66.3810 | 65.0448 | 67.7731 | 41.7349 | 15962 | 8578 | 15905 | 7563 | 5364 | 70.9242 | |
| ciseli-custom | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_11to50 | het | 79.9546 | 88.8056 | 72.7080 | 46.5949 | 9242 | 1165 | 9596 | 3602 | 1710 | 47.4736 | |
| ciseli-custom | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 5.1263 | 0.0000 | 0.0000 | 353 | 6533 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | D1_5 | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 72.3054 | 87.8570 | 61.4314 | 34.0186 | 6367 | 880 | 6309 | 3961 | 3654 | 92.2494 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_11to50 | * | 0.0000 | 0.0000 | 21.8182 | 96.5582 | 0 | 0 | 12 | 43 | 10 | 23.2558 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_11to50 | het | 0.0000 | 0.0000 | 55.5556 | 98.0435 | 0 | 0 | 5 | 4 | 0 | 0.0000 | |
| ciseli-custom | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_11to50 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | C6_15 | lowcmp_SimpleRepeat_diTR_11to50 | homalt | 0.0000 | 0.0000 | 15.2174 | 95.9578 | 0 | 0 | 7 | 39 | 10 | 25.6410 | |
| cchapple-custom | SNP | ti | lowcmp_SimpleRepeat_diTR_11to50 | * | 99.1207 | 98.7596 | 99.4845 | 63.9164 | 4777 | 60 | 4825 | 25 | 19 | 76.0000 | |
| cchapple-custom | SNP | ti | lowcmp_SimpleRepeat_diTR_11to50 | het | 98.9388 | 98.5705 | 99.3099 | 68.9036 | 3103 | 45 | 3166 | 22 | 16 | 72.7273 | |