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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 637 638 639 640 641 642 643 644 645 ... 1720 1721 » 32001-32050 / 86044 show all
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	97.6407	97.4133	97.8690	64.6778	1883	50	1883	41	41	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	95.8781	99.0512	92.9019	82.4220	522	5	445	34	34	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.3707	95.3390	99.4908	31.5202	900	44	977	5	5	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.6757	99.7835	99.5680	64.0528	461	1	461	2	2	100.0000
jmaeng-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	97.9638	97.4619	98.4709	54.8834	31180	812	31104	483	468	96.8944
jmaeng-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	98.4732	98.9378	98.0130	65.7049	12388	133	12233	248	237	95.5645
jmaeng-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	96.7386	93.9847	99.6588	27.1170	10437	668	10516	36	36	100.0000
jmaeng-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	98.7589	99.8685	97.6736	55.3106	8355	11	8355	199	195	97.9899
jmaeng-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jmaeng-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	97.1107	96.2703	97.9659	43.0945	17578	681	17579	365	348	95.3425
jlack-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	98.0315	98.4878	97.5794	54.7750	6578	101	6571	163	149	91.4110
jlack-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	95.4396	91.6508	99.5551	24.5986	6257	570	6265	28	25	89.2857
jlack-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	98.0972	99.7896	96.4613	40.7376	4743	10	4743	174	174	100.0000
jlack-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	96.8636	96.4960	97.2340	52.6642	30871	1121	30794	876	794	90.6393
jlack-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	97.2920	98.4666	96.1450	64.1784	12329	192	12171	488	413	84.6311
jlack-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	95.6093	91.9316	99.5935	30.0616	10209	896	10290	42	37	88.0952
jlack-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	97.7765	99.6055	96.0134	48.3178	8333	33	8333	346	344	99.4220
jlack-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	96.2215	96.1718	96.2714	63.1699	1859	74	1859	72	59	81.9444
jlack-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	92.1621	97.7230	87.2000	81.7983	515	12	436	64	51	79.6875
jlack-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	96.8132	94.2797	99.4867	30.0790	890	54	969	5	5	100.0000
jlack-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	98.8030	98.2684	99.3435	58.5675	454	8	454	3	3	100.0000
hfeng-pmm3	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	95.7839	92.4901	99.3209	86.5999	1170	95	1170	8	3	37.5000
hfeng-pmm3	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	93.6340	88.9169	98.8796	87.9595	706	88	706	8	3	37.5000
hfeng-pmm3	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.0000	2	0	2	0	0
hfeng-pmm3	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.2481	98.5075	100.0000	83.7381	462	7	462	0	0
jlack-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	96.5773	96.2462	96.9108	49.8130	10666	416	10666	340	299	87.9412
jlack-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	95.9795	98.7477	93.3623	66.3775	3233	41	3221	229	194	84.7162
jlack-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	96.2898	93.2880	99.4913	26.4604	5073	365	5085	26	21	80.7692
jlack-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	98.0270	99.5781	96.5235	48.1882	2360	10	2360	85	84	98.8235
jlack-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
qzeng-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	91.6276	91.2822	91.9757	41.4101	29203	2789	47992	4187	3097	73.9670
qzeng-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	93.4659	95.5595	91.4621	42.7719	11965	556	34730	3242	2192	67.6126
qzeng-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	90.2790	82.8456	99.1780	30.0661	9200	1905	2413	20	17	85.0000
qzeng-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	94.0704	96.0794	92.1437	38.7632	8038	328	10849	925	888	96.0000
qzeng-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	0.0000	0.0000	18.1818	92.8571	0	0	2	9	0	0.0000
qzeng-custom	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	0.0000	0.0000	11.1111	89.2857	0	0	1	8	0	0.0000

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