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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 625 626 627 628 629 630 631 632 633 ... 1720 1721 » 31401-31450 / 86044 show all
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	97.1679	96.6993	97.6410	51.8960	13330	455	13328	322	315	97.8261
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	97.3310	98.9920	95.7248	68.7757	3830	39	3784	169	163	96.4497
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.8082	94.2070	99.5571	26.7517	6700	412	6744	30	30	100.0000
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	97.7824	99.8573	95.7920	54.8083	2800	4	2800	123	122	99.1870
ckim-vqsr	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	96.7805	96.6355	96.9260	63.2253	3102	108	3090	98	93	94.8980
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	94.9234	99.0868	91.0959	82.4814	868	8	665	65	61	93.8462
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.5196	93.9394	99.2455	33.2429	1519	98	1710	13	13	100.0000
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.4848	99.7211	97.2789	61.7387	715	2	715	20	19	95.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	97.9357	97.2033	98.6791	48.0009	20020	576	20021	268	262	97.7612
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	98.8419	99.1062	98.5790	59.3072	7318	66	7284	105	100	95.2381
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.6223	93.7986	99.6213	24.3454	7593	502	7628	29	29	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.6293	99.8437	97.4442	51.1779	5109	8	5109	134	133	99.2537
egarrison-hhga	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	75.3208	65.0467	89.4493	64.1933	2088	1122	2128	251	224	89.2430
egarrison-hhga	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	82.8480	83.5616	82.1464	73.3422	732	144	819	178	170	95.5056
egarrison-hhga	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	58.0207	41.0019	99.1935	43.8406	663	954	615	5	5	100.0000
egarrison-hhga	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	93.7816	96.6527	91.0761	57.6667	693	24	694	68	49	72.0588
egarrison-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	82.5425	81.8606	83.2358	38.5631	16860	3736	16926	3409	3210	94.1625
egarrison-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	82.1732	97.9957	70.7498	40.7293	7236	148	7624	3152	3088	97.9695
egarrison-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	73.7322	58.7029	99.1053	30.0313	4752	3343	4431	40	34	85.0000
egarrison-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	95.4728	95.2120	95.7351	40.3377	4872	245	4871	217	88	40.5530
egarrison-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	77.1234	70.6347	84.9247	50.6689	9737	4048	9864	1751	1570	89.6630
egarrison-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	83.8170	96.5624	74.0438	56.3581	3736	133	4259	1493	1471	98.5265
egarrison-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	63.1996	46.4567	98.8107	36.5459	3304	3808	2908	35	31	88.5714
egarrison-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	94.2348	96.1840	92.3630	49.0134	2697	107	2697	223	68	30.4933
egarrison-hhga	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	83.1419	76.6600	90.8213	72.4184	381	116	376	38	25	65.7895
egarrison-hhga	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	84.6884	81.9549	87.6106	84.2399	109	24	99	14	7	50.0000
egarrison-hhga	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	83.8820	73.9003	96.9811	55.3872	252	89	257	8	7	87.5000
egarrison-hhga	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	67.7966	86.9565	55.5556	81.0526	20	3	20	16	11	68.7500
egarrison-hhga	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	84.1642	83.2621	85.0860	71.1301	31558	6344	32017	5612	5145	91.6785
egarrison-hhga	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	84.4168	96.1004	75.2662	52.8425	14047	570	14984	4924	4785	97.1771
egarrison-hhga	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	75.6523	61.3266	98.7108	36.0827	8441	5323	7963	104	95	91.3462
egarrison-hhga	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	94.6023	95.2631	93.9507	47.7088	9070	451	9070	584	265	45.3767
egarrison-hhga	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	93.5967	90.2348	97.2188	50.5577	3151	341	3146	90	73	81.1111
egarrison-hhga	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	93.6854	91.9137	95.5267	69.7908	682	60	662	31	19	61.2903

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