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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 612 613 614 615 616 617 618 619 620 ... 1720 1721 » 30751-30800 / 86044 show all
ndellapenna-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	63.9253	47.2441	98.8157	36.3273	3360	3752	2837	34	29	85.2941
ndellapenna-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	92.7491	96.2553	89.4894	50.3947	2699	105	2699	317	129	40.6940
raldana-dualsentieon	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	97.1585	95.7079	98.6538	44.4898	19712	884	19713	269	264	98.1413
raldana-dualsentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	97.1088	95.8830	98.3664	54.5270	7080	304	7045	117	113	96.5812
raldana-dualsentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.3442	92.9463	100.0000	24.7911	7524	571	7560	0	0
raldana-dualsentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.4485	99.8241	97.1103	48.4061	5108	9	5108	152	151	99.3421
raldana-dualsentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	96.2310	94.8350	97.6687	49.0598	13073	712	13071	312	308	98.7179
raldana-dualsentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	95.1163	94.9599	95.2731	65.4635	3674	195	3628	180	177	98.3333
raldana-dualsentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.2736	92.8150	100.0000	26.1913	6601	511	6645	0	0
raldana-dualsentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	97.5933	99.7860	95.4949	53.0674	2798	6	2798	132	131	99.2424
raldana-dualsentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	93.7263	90.1408	97.6087	73.5936	448	49	449	11	8	72.7273
raldana-dualsentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	92.7659	88.7218	97.1963	86.4213	118	15	104	3	1	33.3333
raldana-dualsentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	94.6139	90.0293	99.6904	56.8182	307	34	322	1	1	100.0000
raldana-dualsentieon	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	86.7925	100.0000	76.6667	85.4369	23	0	23	7	6	85.7143
raldana-dualsentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	96.2112	93.3565	99.2459	50.4272	6450	459	6449	49	44	89.7959
raldana-dualsentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	97.3707	95.9702	98.8127	71.1458	1548	65	1498	18	13	72.2222
raldana-dualsentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	95.6668	91.6936	100.0000	25.6384	4261	386	4310	0	0
raldana-dualsentieon	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	97.0477	98.7673	95.3869	67.3469	641	8	641	31	31	100.0000
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	95.8304	94.6417	97.0494	60.1686	3038	172	3026	92	90	97.8261
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	91.5664	93.9498	89.3010	79.9025	823	53	626	75	74	98.6667
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.1914	92.7644	99.8814	32.5739	1500	117	1685	2	2	100.0000
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.8252	99.7211	97.9452	60.2829	715	2	715	15	14	93.3333
raldana-dualsentieon	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
raldana-dualsentieon	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	94.6821	90.4306	99.3530	87.4575	2457	260	2457	16	11	68.7500
raldana-dualsentieon	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	92.0134	85.8844	99.0844	88.5511	1515	249	1515	14	9	64.2857
raldana-dualsentieon	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.9091	2	0	2	0	0
raldana-dualsentieon	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	99.3133	98.8433	99.7877	85.1420	940	11	940	2	2	100.0000
rpoplin-dv42	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	96.0244	95.4725	96.5827	67.7509	36186	1716	36120	1278	1242	97.1831
rpoplin-dv42	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	94.9862	97.5782	92.5283	63.5798	14263	354	14130	1141	1110	97.2831
rpoplin-dv42	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	95.4697	91.8338	99.4055	29.1133	12640	1124	12707	76	75	98.6842
rpoplin-dv42	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.4151	97.5003	99.3472	47.2567	9283	238	9283	61	57	93.4426
rpoplin-dv42	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
rpoplin-dv42	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
rpoplin-dv42	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
rpoplin-dv42	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
rpoplin-dv42	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
rpoplin-dv42	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0

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