PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
2901-2950 / 86044 show all
ckim-dragenSNPtvdecoy*
0.0000
100.0000
00000
ckim-dragenSNPtvdecoyhet
0.0000
100.0000
00000
ckim-dragenSNPtvdecoyhetalt
0.0000
100.0000
00000
ckim-dragenSNPtvdecoyhomalt
0.0000
100.0000
00000
ckim-gatkINDELC1_5decoy*
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC1_5decoyhet
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC1_5decoyhetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC1_5decoyhomalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI1_5decoy*
0.0000
100.0000
00000
cchapple-customINDELI1_5decoyhet
0.0000
100.0000
00000
cchapple-customINDELI1_5decoyhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI1_5decoyhomalt
0.0000
100.0000
00000
cchapple-customINDELI6_15decoy*
0.0000
100.0000
00000
cchapple-customINDELI6_15decoyhet
0.0000
100.0000
00000
cchapple-customINDELI6_15decoyhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI6_15decoyhomalt
0.0000
100.0000
00000
cchapple-customINDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.0895
60600
cchapple-customINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.2819
40400
cchapple-customINDELD16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
98.0392
20200
cchapple-customSNPtidecoy*
0.0000
100.0000
00000
cchapple-customSNPtidecoyhet
0.0000
100.0000
00000
cchapple-customSNPtidecoyhetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNPtidecoyhomalt
0.0000
100.0000
00000
cchapple-customINDELI16_PLUSdecoy*
0.0000
100.0000
00000
cchapple-customINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
cchapple-customINDELI16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
cchapple-customINDELD1_5decoy*
100.0000
100.0000
100.0000
99.9664
40300
cchapple-customINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9733
20200
cchapple-customINDELD1_5decoyhetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9303
10100
cchapple-customINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9217
10100
cchapple-customINDELD6_15decoyhet
0.0000
0.0000
100.0000
99.9088
00100
cchapple-customINDELD6_15decoyhetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDELD6_15decoyhomalt
0.0000
100.0000
00000
cchapple-customSNP*decoy*
0.0000
100.0000
00000
cchapple-customSNP*decoyhet
0.0000
100.0000
00000
cchapple-customSNP*decoyhetalt
0.0000
0.0000
0.0000
00000
cchapple-customSNP*decoyhomalt
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
98.2405
60600
ckim-isaacINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
98.2063
40400
ckim-isaacINDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
ckim-isaacINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
96.4912
20200
ckim-gatkSNPtvdecoy*
0.0000
100.0000
00000
ckim-gatkSNPtvdecoyhet
0.0000
100.0000
00000
ckim-gatkSNPtvdecoyhetalt
0.0000
100.0000
00000
ckim-gatkSNPtvdecoyhomalt
0.0000
100.0000
00000
ckim-isaacINDEL*decoy*
100.0000
100.0000
100.0000
99.9321
1001000
ckim-isaacINDEL*decoyhet
100.0000
100.0000
100.0000
99.9477
60600