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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 530 531 532 533 534 535 536 537 538 ... 1720 1721 » 26651-26700 / 86044 show all
astatham-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	93.6552	88.4686	99.4878	37.7483	2409	314	2525	13	13	100.0000
astatham-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	93.6375	98.9848	88.8383	60.2115	1170	12	1170	147	145	98.6395
anovak-vg	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	32.6056	25.2495	46.0100	54.7659	253	749	369	433	324	74.8268
anovak-vg	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	43.3697	38.1944	50.1672	54.4901	110	178	300	298	216	72.4832
anovak-vg	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	0.0000	16.2975	0.0000	0.0000	103	529	0	0	0
anovak-vg	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	39.9479	48.7805	33.8235	55.5556	40	42	69	135	108	80.0000
astatham-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	68.6189	80.5430	59.7701	87.2900	178	43	208	140	52	37.1429
anovak-vg	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	64.1521	78.2895	54.3396	87.4882	119	33	144	121	38	31.4050
anovak-vg	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	81.0909	85.5072	77.1084	86.6129	59	10	64	19	14	73.6842
anovak-vg	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	65.6904	70.9091	61.1872	88.2131	117	48	134	85	29	34.1176
anovak-vg	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	60.5316	65.3226	56.3953	87.8359	81	43	97	75	22	29.3333
anovak-vg	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	83.0165	87.8049	78.7234	89.4144	36	5	37	10	7	70.0000
anovak-vg	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	16.9764	10.8209	39.3750	52.0958	58	478	63	97	77	79.3814
anovak-vg	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	23.2825	16.1074	41.9847	51.3011	24	125	55	76	63	82.8947
anovak-vg	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	0.0000	7.7135	0.0000	0.0000	28	335	0	0	0
anovak-vg	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	26.2295	25.0000	27.5862	55.3846	6	18	8	21	14	66.6667
anovak-vg	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	67.7132	76.4249	60.7843	87.7538	295	91	341	220	80	36.3636
anovak-vg	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	63.0411	72.4638	55.7870	87.7238	200	76	241	191	59	30.8901
anovak-vg	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	81.7029	86.3636	77.5194	87.8531	95	15	100	29	21	72.4138
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	96.1538	92.5926	100.0000	92.2481	25	2	20	0	0
astatham-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	93.6937	88.1356	100.0000	73.7327	52	7	57	0	0
astatham-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	50.0000	100.0000	33.3333	94.9153	1	0	1	2	2	100.0000
astatham-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	93.4715	90.0200	97.1983	64.9943	902	100	902	26	23	88.4615
astatham-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	95.9826	96.1806	95.7854	80.4641	277	11	250	11	8	72.7273
astatham-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	92.7905	86.5506	100.0000	38.2131	547	85	574	0	0
astatham-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	89.1429	95.1220	83.8710	75.9067	78	4	78	15	15	100.0000
astatham-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	97.2405	95.8549	98.6667	91.1368	370	16	370	5	3	60.0000
astatham-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	96.8807	95.6522	98.1413	91.1948	264	12	264	5	3	60.0000
astatham-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	98.1481	96.3636	100.0000	90.9633	106	4	106	0	0
astatham-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	93.3705	92.2714	94.4961	50.6515	2543	213	2541	148	144	97.2973
astatham-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	92.3991	97.0540	88.1703	71.9469	593	18	559	75	71	94.6667
astatham-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	93.8167	88.7588	99.4859	30.0360	1516	192	1548	8	8	100.0000
astatham-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	92.7350	99.3135	86.9739	48.2902	434	3	434	65	65	100.0000
astatham-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	93.4132	89.6552	97.5000	85.0187	78	9	78	2	2	100.0000

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