PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
2501-2550 / 86044 show all | |||||||||||||||
| rpoplin-dv42 | INDEL | D16_PLUS | decoy | * | 90.9091 | 83.3333 | 100.0000 | 98.7715 | 5 | 1 | 5 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | D16_PLUS | decoy | het | 85.7143 | 75.0000 | 100.0000 | 98.9362 | 3 | 1 | 3 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | D16_PLUS | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | D16_PLUS | decoy | homalt | 100.0000 | 100.0000 | 100.0000 | 98.0952 | 2 | 0 | 2 | 0 | 0 | ||
| rpoplin-dv42 | SNP | * | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | SNP | * | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | SNP | * | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | SNP | * | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | SNP | ti | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | SNP | ti | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | SNP | ti | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | SNP | ti | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | SNP | tv | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | SNP | tv | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | SNP | tv | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | SNP | tv | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I16_PLUS | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I16_PLUS | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I16_PLUS | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I16_PLUS | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | D1_5 | decoy | * | 100.0000 | 100.0000 | 100.0000 | 99.9439 | 4 | 0 | 4 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | D1_5 | decoy | het | 100.0000 | 100.0000 | 100.0000 | 99.9601 | 2 | 0 | 2 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | D1_5 | decoy | hetalt | 100.0000 | 100.0000 | 100.0000 | 99.6700 | 1 | 0 | 1 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | D1_5 | decoy | homalt | 100.0000 | 100.0000 | 100.0000 | 99.9450 | 1 | 0 | 1 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | D6_15 | decoy | * | 100.0000 | 100.0000 | 100.0000 | 99.9005 | 1 | 0 | 1 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | D6_15 | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | D6_15 | decoy | hetalt | 100.0000 | 100.0000 | 100.0000 | 98.9474 | 1 | 0 | 1 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | D6_15 | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | SNP | ti | decoy | * | 0.0000 | 0.0000 | 100.0000 | 99.9987 | 0 | 0 | 2 | 0 | 0 | ||
| qzeng-custom | SNP | ti | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | SNP | ti | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | SNP | ti | decoy | homalt | 0.0000 | 0.0000 | 100.0000 | 99.9922 | 0 | 0 | 2 | 0 | 0 | ||
| qzeng-custom | INDEL | D6_15 | decoy | * | 100.0000 | 100.0000 | 1 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | D6_15 | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | D6_15 | decoy | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 1 | 0 | 0 | 0 | 0 | ||
| qzeng-custom | INDEL | D6_15 | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| raldana-dualsentieon | INDEL | * | decoy | * | 100.0000 | 100.0000 | 100.0000 | 99.9200 | 10 | 0 | 10 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | decoy | het | 100.0000 | 100.0000 | 100.0000 | 99.9259 | 6 | 0 | 6 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | decoy | hetalt | 100.0000 | 100.0000 | 100.0000 | 99.8020 | 1 | 0 | 1 | 0 | 0 | ||
| raldana-dualsentieon | INDEL | * | decoy | homalt | 100.0000 | 100.0000 | 100.0000 | 99.9232 | 3 | 0 | 3 | 0 | 0 | ||
| qzeng-custom | SNP | * | decoy | * | 0.0000 | 0.0000 | 100.0000 | 99.9992 | 0 | 0 | 2 | 0 | 0 | ||
| qzeng-custom | SNP | * | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | SNP | * | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | SNP | * | decoy | homalt | 0.0000 | 0.0000 | 100.0000 | 99.9952 | 0 | 0 | 2 | 0 | 0 | ||
| qzeng-custom | INDEL | I16_PLUS | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | I16_PLUS | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||