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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
18901-18950 / 86044 show all
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
55.8126
45.6817
71.7174
42.4460
28883434659826022576
99.0008
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
75.7026
69.8630
82.6075
47.3461
13775943073647636
98.2998
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
40.3639
25.5814
95.6173
48.0711
902262417898281
98.7805
eyeh-varpipeINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
58.2480
73.8182
48.1020
32.1234
609216173618731859
99.2525
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
66.0309
61.2472
71.6250
49.8874
1082368481083442924156
96.8313
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
88.2450
85.0667
91.6700
56.4134
49738734523411383
93.1873
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
45.2414
29.6315
95.6081
53.7572
238856712830130123
94.6154
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
63.1837
91.9278
48.1333
41.9722
3462304348137513650
97.3074
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
69.0773
96.1442
0127712470
56.4516
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
78.3217
96.5283
01112314
12.9032
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
70.6250
95.1427
001134742
89.3617
eyeh-varpipeINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
53.0612
96.7191
00524624
52.1739
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
81.0523
77.6490
84.7677
58.0295
2438870202517645244294
94.9160
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
95.0193
92.3530
97.8441
60.3645
12705105212662279130
46.5950
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
52.9384
36.4654
96.5577
59.1585
338859033899139129
92.8058
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
80.5008
99.2225
67.7227
54.9332
829565861541064035
98.2708
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.6405
97.3120
97.9712
57.8582
1719647517191356338
94.9438
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
97.9716
99.0079
96.9569
71.5543
5788585735180166
92.2222
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.1244
94.8753
99.4828
30.2426
764641376944038
95.0000
dgrover-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
98.1733
99.8938
96.5110
60.0492
376243762136134
98.5294
dgrover-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
99.4424
99.5121
99.3729
70.5814
454792234547928731
10.8014
dgrover-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
99.2336
99.4427
99.0254
72.4471
285521602855228126
9.2527
dgrover-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
87.5000
1501500
dgrover-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.7964
99.6289
99.9645
66.6982
16912631691265
83.3333
dgrover-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
99.4591
99.4895
99.4288
67.6195
309841593098417819
10.6742
dgrover-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
99.2708
99.4280
99.1141
69.5332
194671121946717416
9.1954
dgrover-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
84.4156
1201200
dgrover-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.7788
99.5931
99.9652
63.6860
11505471150543
75.0000
dgrover-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
99.4073
99.5608
99.2542
75.3973
14507641450710912
11.0092
dgrover-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
99.1542
99.4744
98.8359
77.1224
908548908510710
9.3458
dgrover-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
87.5000
1501500
dgrover-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.8338
99.7050
99.9630
71.6940
540716540722
100.0000
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
98.4673
97.4995
99.4544
67.8523
15675402156768670
81.3953
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
99.0909
98.7850
99.3987
76.0252
63427862823824
63.1579
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.3638
94.8948
99.9647
39.6673
5595301565622
100.0000
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.0855
99.3885
98.7844
71.5296
37382337384644
95.6522
dgrover-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.8137
96.5992
99.0592
63.6797
610721561075848
82.7586
dgrover-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
98.6653
98.1228
99.2138
75.9182
1934371893157
46.6667
dgrover-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.3835
94.9801
99.9116
43.2609
3349177339033
100.0000
dgrover-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
97.5725
99.8788
95.3704
71.8658
82418244038
95.0000
dgrover-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
98.5384
98.0960
98.9848
61.0949
3081059830810316292
92.4051
dgrover-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
99.0981
99.2004
98.9959
68.2271
1364711013606138117
84.7826
dgrover-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.1571
94.8660
99.5615
32.7282
881447788553937
94.8718
dgrover-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.1097
99.8684
98.3624
63.9223
8349118349139138
99.2806
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.4939
96.6013
98.4032
85.1394
14785214792416
66.6667
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
97.7049
96.8468
98.5782
88.2123
6452162493
33.3333
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.4450
95.2959
99.6933
71.1249
6283165022
100.0000
dgrover-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
96.9267
100.0000
94.0367
91.2309
20502051311
84.6154
ckim-isaacINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
89.4795
84.4436
95.1541
60.5296
13576250113588692434
62.7168
ckim-isaacINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
90.1406
89.3302
90.9658
70.1878
57356855689565335
59.2920