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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
18751-18800 / 86044 show all
jmaeng-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
95.7952
91.9607
99.9635
35.1166
5422474548022
100.0000
jmaeng-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.0456
99.3353
98.7576
71.4856
37362537364745
95.7447
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
98.1915
97.4975
98.8955
61.4377
3062278630622342309
90.3509
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
98.8269
98.7352
98.9188
69.0820
1358317413540148116
78.3784
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.4888
93.5852
99.5783
30.8129
869559687383737
100.0000
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
98.9740
99.8086
98.1532
63.5791
8344168344157156
99.3631
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
96.0831
94.5752
97.6399
85.2261
14478314483520
57.1429
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
96.1476
94.4444
97.9133
88.6665
62937610133
23.0769
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.3185
93.1715
99.6855
68.3267
6144563422
100.0000
jmaeng-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
95.1049
99.5122
91.0714
91.1567
20412042015
75.0000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
40.0753
30.3227
59.0755
67.9189
19174405191713281307
98.4187
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
63.2704
73.8711
55.3303
67.2928
1456515147411901180
99.1597
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.4821
0.0000
0.0000
173509000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
63.0990
53.8182
76.2478
70.5076
444381443138127
92.0290
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
90.7947
97.9343
84.6254
85.1417
14270301143222602202
7.7633
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
87.8581
97.1203
80.2087
86.4645
88702638916220030
1.3636
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
96.2176
99.5759
93.0785
81.7232
5400235406402172
42.7861
ltrigg-rtg1INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.3301
95.6145
99.1085
62.8544
62485286662808565237
41.9469
ltrigg-rtg1INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
97.1631
95.7743
98.5927
68.0014
2919212882914441697
23.3173
ltrigg-rtg1INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
95.9739
92.7447
99.4362
52.4133
154931212158729088
97.7778
ltrigg-rtg1INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
98.8202
97.9852
99.6695
59.8782
17800366177925952
88.1356
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
89.4737
96.3844
003443
75.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
78.5714
96.3918
001132
66.6667
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
93.3333
96.2312
001411
100.0000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
100.0000
96.6038
00900
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
95.2602
98.2179
92.4754
79.7293
30588555306752496323
12.9407
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
94.0567
97.5229
90.8285
81.7751
1909448519163193559
3.0491
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
012000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
97.3815
99.4979
95.3533
74.7822
114945811512561264
47.0588
jpowers-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
41.1230
32.4837
56.0227
78.9373
4971033493387383
98.9664
jpowers-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
57.4755
62.1622
53.4460
78.1472
414252411358355
99.1620
jpowers-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.3035
0.0000
0.0000
2657000
jpowers-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
51.4864
39.5122
73.8739
83.1563
81124822928
96.5517
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
61.8393
51.5519
77.2561
71.5347
82887789826124322302
94.6546
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
78.6552
86.4019
72.1833
72.7812
5547873556121432067
96.4536
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.5767
0.0000
0.0000
345862000
jpowers-varprowlINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
80.1154
71.9755
90.3312
67.7249
270710542700289235
81.3149
jpowers-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
93.8037
98.1533
89.8233
81.9505
44858844449975098525
10.2982
jpowers-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
91.9958
97.3948
87.1640
83.7213
2796474828079413589
2.1524
jpowers-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
015000
jpowers-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
97.0066
99.5228
94.6144
77.5514
168948116918963436
45.2752
ckim-vqsrINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
96.5454
94.9673
98.1769
85.0222
14537714542718
66.6667
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
96.6974
95.4955
97.9299
88.5024
63630615135
38.4615
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.3190
93.1715
99.6865
67.9236
6144563622
100.0000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
96.6667
99.0244
94.4186
91.1777
20322031211
91.6667