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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
16801-16850 / 86044 show all
ndellapenna-hhgaINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
83.9138
82.9573
84.8926
46.2434
1845837921853832993068
92.9979
ndellapenna-hhgaINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
84.3874
97.5345
74.3636
48.4035
8189207867629912903
97.0578
ndellapenna-hhgaINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
74.1810
59.3050
99.0185
33.0396
4847332644394437
84.0909
ndellapenna-hhgaINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
95.3994
95.4409
95.3578
49.7393
54222595423264128
48.4848
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
5.2632
75.0000
001182
11.1111
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
5.8824
68.5185
001162
12.5000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
81.8182
00020
0.0000
gduggal-snapfbINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
42.8571
96.1538
00343
75.0000
gduggal-snapfbINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
40.0000
93.2432
00232
66.6667
gduggal-snapfbINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
50.0000
97.9167
00111
100.0000
gduggal-snapfbINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
0.0000
04067000
gduggal-snapfbINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
0.0000
01330000
gduggal-snapfbINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01649000
gduggal-snapfbINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
01088000
gduggal-snapfbINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
94.0248
95.3430
92.7426
84.9164
1029850310121792175
22.0960
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
92.1673
95.3799
89.1641
87.4464
65653186443783169
21.5837
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
03000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
97.5038
95.3512
99.7559
75.0693
3733182367896
66.6667
gduggal-bwavardSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
93.3020
94.5490
92.0875
85.9655
3920226382932986
26.1398
gduggal-bwavardSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
91.3850
94.7826
88.2225
88.3133
2507138244232684
25.7669
gduggal-bwavardSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
03000
gduggal-bwavardSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
96.9782
94.3258
99.7842
76.6072
141385138732
66.6667
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
78.3192
73.5341
83.7704
54.2583
31866114693629170313645
51.8418
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
79.1914
73.9716
85.2037
51.7929
1318146382431842231294
30.6417
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
75.3642
66.6334
86.7280
50.6405
935046822640404232
57.4257
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
80.3927
81.2870
79.5178
59.9939
93352149933324042119
88.1448
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
94.3224
95.8089
92.8813
84.3204
6378279631548493
19.2149
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
92.4479
95.7527
89.3636
86.9652
4058180401647889
18.6192
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
gduggal-bwavardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
97.8272
95.9868
99.7397
74.0574
232097229964
66.6667
gduggal-snapfbSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
62.0729
98.0650
45.4073
82.4158
105922091075712933236
1.8248
gduggal-snapfbSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
53.7666
97.5737
37.1070
80.0383
6716167688011661159
1.3635
gduggal-snapfbSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
3.6810
100.0000
1.8750
78.4657
3031573
1.9108
gduggal-snapfbSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
87.0072
98.9272
77.6508
87.8604
3873423874111574
6.6368
gduggal-snapfbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
67.6742
98.1523
51.6392
81.2351
653412366476225139
2.2329
gduggal-snapfbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
59.7519
97.7584
43.0248
79.6303
41439542535632101
1.7933
gduggal-snapfbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
3.2258
100.0000
1.6393
75.6487
2021202
1.6667
gduggal-snapfbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
90.5197
98.8415
83.4904
85.3580
238928239247336
7.6110
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
66.8635
56.6333
81.6046
52.1656
220716901424321304
94.7040
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
66.6828
57.1125
80.1061
51.0601
538404906225212
94.2222
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
69.8922
57.3374
89.4866
50.3641
151611283664339
90.6977
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
59.1477
49.1961
74.1463
60.0390
1531581525353
100.0000
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
87.5291
86.9258
88.1409
52.6080
1934129092014927111465
54.0391
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
89.3383
88.9709
89.7087
51.9572
7470926125961445343
23.7370