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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 268 269 270 271 272 273 274 275 276 ... 1720 1721 » 13551-13600 / 86044 show all
gduggal-snapplat	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	56.3564	39.9149	95.8304	60.8880	2719	4093	2735	119	102	85.7143
gduggal-snapplat	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	57.7611	43.8153	84.7293	69.3664	1594	2044	1487	268	182	67.9104
gduggal-snapplat	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapplat	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapplat	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	67.1528	57.9879	79.7584	80.2389	54769	39680	61674	15652	4576	29.2359
gduggal-snapplat	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	65.4034	58.8863	73.5426	80.9801	28425	19846	32333	11632	1955	16.8071
gduggal-snapplat	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	54.4770	39.2554	88.9798	82.4941	6052	9365	6088	754	644	85.4111
gduggal-snapplat	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	75.2906	65.9666	87.6843	78.0956	20292	10469	23253	3266	1977	60.5328
gduggal-snapplat	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*		0.0000	0.0000	90.9091	0	3	0	2	0	0.0000
gduggal-snapplat	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het		0.0000	0.0000	87.5000	0	3	0	2	0	0.0000
gduggal-snapplat	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	76.9680	69.6854	85.9503	79.9286	44899	19532	52067	8511	3951	46.4223
gduggal-snapplat	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	77.1866	71.6422	83.6612	80.1878	23811	9425	27896	5448	1746	32.0485
gduggal-snapplat	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	59.5098	45.1054	87.4307	85.0479	4193	5103	4257	612	532	86.9281
gduggal-snapplat	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	82.6699	77.1496	89.0409	77.8450	16895	5004	19914	2451	1673	68.2579
gduggal-snapplat	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	3561	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	1355	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1294	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	912	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	44.1015	42.1796	46.2069	48.7496	2241	3072	3551	4134	3627	87.7358
gduggal-snapvard	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	55.8285	72.0960	45.5506	48.7100	1111	430	3450	4124	3618	87.7304
gduggal-snapvard	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	34.5303	0.0000	0.0000	1077	2042	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	14.9034	8.1164	90.9910	51.3158	53	600	101	10	9	90.0000
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	80.4680	83.0514	78.0406	69.2847	53510	10920	63120	17761	15073	84.8657
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	83.2099	96.3623	73.2167	70.3492	32026	1209	47861	17508	14830	84.7041
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	66.9535	0.0000	0.0000	6224	3072	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	81.5781	69.6835	98.3690	63.8094	15260	6639	15259	253	243	96.0474
gduggal-snapvard	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	59.1721	54.4401	64.8052	53.7673	8736	7311	8947	4859	4228	87.0138
gduggal-snapvard	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	70.7753	78.9709	64.1209	53.4898	4420	1177	8614	4820	4189	86.9087
gduggal-snapvard	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	56.7821	0.0000	0.0000	3868	2944	0	0	0
gduggal-snapvard	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	21.6505	12.3145	89.5161	61.9632	448	3190	333	39	39	100.0000
gduggal-snapvard	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	54.3265	100.0000	37.2933	91.2179	3	0	857	1441	188	13.0465
gduggal-snapvard	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	49.3757	100.0000	32.7807	90.9114	3	0	692	1419	174	12.2622
gduggal-snapvard	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	0.0000	0.0000	88.2353	93.6395	0	0	165	22	14	63.6364
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	5.1744	2.8363	29.4574	72.6502	101	3460	114	273	176	64.4689
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	9.1482	5.4613	28.1579	72.1408	74	1281	107	273	176	64.4689
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	1.6229	0.0000	0.0000	21	1273	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	1.3072	0.6579	100.0000	86.2745	6	906	7	0	0
gduggal-snapvard	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	77.1368	72.0532	82.9923	72.5173	11223	4353	45225	9268	7975	86.0488
gduggal-snapvard	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	84.6909	92.5107	78.0901	74.9769	5645	457	32751	9189	7904	86.0159
gduggal-snapvard	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	58.8176	0.0000	0.0000	3492	2445	0	0	0
gduggal-snapvard	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	74.0214	58.9765	99.3707	59.0788	2086	1451	12474	79	71	89.8734

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