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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 262 263 264 265 266 267 268 269 270 ... 1720 1721 » 13251-13300 / 86044 show all
ltrigg-rtg2	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.6427	96.1360	99.1974	40.4967	1244	50	1236	10	10	100.0000
ltrigg-rtg2	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	97.7599	95.7237	99.8847	53.2615	873	39	866	1	1	100.0000
ltrigg-rtg1	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.5720	99.5845	99.5594	59.6473	27563	115	27568	122	11	9.0164
ltrigg-rtg1	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4459	99.5389	99.3531	60.6036	17487	81	17508	114	9	7.8947
ltrigg-rtg1	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.0000	92.3077	100.0000	77.1930	12	1	13	0	0
ltrigg-rtg1	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.7967	99.6732	99.9204	57.8106	10064	33	10047	8	2	25.0000
ltrigg-rtg2	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	78.3552	66.6667	95.0139	97.4690	2	1	343	18	1	5.5556
ltrigg-rtg2	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	76.1364	66.6667	88.7417	97.5582	2	1	134	17	1	5.8824
ltrigg-rtg2	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	100.0000	96.9221	0	0	141	0	0
ltrigg-rtg2	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	0.0000	0.0000	98.5507	98.0274	0	0	68	1	0	0.0000
ltrigg-rtg2	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	100.0000	100.0000	100.0000	95.1891	1	0	173	0	0
ltrigg-rtg2	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	100.0000	100.0000	100.0000	94.4528	1	0	74	0	0
ltrigg-rtg2	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	100.0000	94.8143	0	0	81	0	0
ltrigg-rtg2	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	0.0000	0.0000	100.0000	97.4286	0	0	18	0	0
ckim-isaac	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	91.8499	88.8266	95.0863	43.5099	14254	1793	14165	732	583	79.6448
ckim-isaac	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	90.3594	91.9064	88.8636	53.3705	5144	453	4684	587	468	79.7274
ckim-isaac	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	92.6375	87.4780	98.4438	32.3935	5959	853	6326	100	89	89.0000
ckim-isaac	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	92.2162	86.6135	98.5938	42.4667	3151	487	3155	45	26	57.7778
ckim-isaac	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-gatk	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.5094	99.6893	99.3302	65.3964	27592	86	27582	186	18	9.6774
ckim-gatk	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.3819	99.8008	98.9665	67.1777	17533	35	17523	183	15	8.1967
ckim-gatk	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.0000	92.3077	100.0000	83.3333	12	1	12	0	0
ckim-gatk	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.7369	99.5048	99.9701	61.6836	10047	50	10047	3	3	100.0000
ckim-isaac	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	3	0	0	0
ckim-isaac	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	3	0	0	0
ckim-isaac	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	96.4197	94.8503	98.0420	61.5230	61113	3318	60987	1218	972	79.8030
ckim-isaac	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	96.8145	96.7836	96.8455	61.4159	32167	1069	31775	1035	815	78.7440
ckim-isaac	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	93.3528	88.7263	98.4883	45.1727	8248	1048	8535	131	123	93.8931
ckim-isaac	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	97.0619	94.5157	99.7491	65.9214	20698	1201	20677	52	34	65.3846
ckim-isaac	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	94.4269	92.1672	96.8002	61.2699	87051	7398	86368	2855	2059	72.1191
ckim-isaac	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	94.7847	94.6676	94.9020	63.1937	45697	2574	44659	2399	1704	71.0296
ckim-isaac	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	91.1346	84.9322	98.3142	43.5277	13094	2323	13472	231	203	87.8788
ckim-isaac	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	95.3986	91.8696	99.2095	63.6282	28260	2501	28237	225	152	67.5556
ckim-isaac	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	86.8178	81.4097	92.9955	56.2615	2899	662	2881	217	142	65.4378
ckim-isaac	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	83.1246	82.0664	84.2105	65.4096	1112	243	896	168	107	63.6905
ckim-isaac	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	87.8990	80.2937	97.0958	47.6367	1039	255	1237	37	31	83.7838
ckim-isaac	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	89.4737	82.0175	98.4211	51.7154	748	164	748	12	4	33.3333
ckim-dragen	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.6173	97.7724	99.4771	72.6068	15230	347	15218	80	60	75.0000
ckim-dragen	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4656	99.3773	99.5540	78.3693	6064	38	6027	27	7	25.9259
ckim-dragen	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.3380	94.8299	99.9823	61.6765	5631	307	5659	1	1	100.0000
ckim-dragen	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.2414	99.9435	98.5491	72.6182	3535	2	3532	52	52	100.0000

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