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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 256 257 258 259 260 261 262 263 264 ... 1720 1721 » 12951-13000 / 86044 show all
eyeh-varpipe	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	82.8070	95.5800	0	0	236	49	46	93.8776
eyeh-varpipe	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	0.0000	0.0000	84.0816	96.2647	0	0	206	39	28	71.7949
egarrison-hhga	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.3239	99.0379	99.6116	52.2441	27690	269	27695	108	53	49.0741
egarrison-hhga	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.2155	98.8292	99.6047	53.9964	17642	209	17640	70	27	38.5714
egarrison-hhga	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	92.3077	100.0000	85.7143	81.5789	6	0	6	1	1	100.0000
egarrison-hhga	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5195	99.4061	99.6332	48.7604	10042	60	10049	37	25	67.5676
egarrison-hhga	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	97.6760	96.8929	98.4720	68.6413	15093	484	15080	234	134	57.2650
egarrison-hhga	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	97.9478	97.9351	97.9605	73.1911	5976	126	5956	124	48	38.7097
egarrison-hhga	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.4215	95.7225	99.1819	60.8518	5684	254	5698	47	44	93.6170
egarrison-hhga	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	97.6237	97.0597	98.1943	69.6107	3433	104	3426	63	42	66.6667
egarrison-hhga	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.4287	99.1605	99.6983	57.8100	55164	467	55180	167	88	52.6946
egarrison-hhga	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.3357	98.9921	99.6817	59.1116	35062	357	35070	112	48	42.8571
egarrison-hhga	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.2963	100.0000	92.8571	80.2817	13	0	13	1	1	100.0000
egarrison-hhga	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5935	99.4554	99.7320	55.2895	20089	110	20097	54	39	72.2222
eyeh-varpipe	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	87.5783	85.5583	89.6959	70.2246	80809	13640	139087	15978	15625	97.7907
eyeh-varpipe	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	94.9804	93.5841	96.4190	67.2497	45174	3097	79672	2959	2749	92.9030
eyeh-varpipe	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	56.5705	40.1699	95.6035	76.3129	6193	9224	10155	467	451	96.5739
eyeh-varpipe	INDEL	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	86.9712	95.7121	79.6933	69.9711	29442	1319	49260	12552	12425	98.9882
egarrison-hhga	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	94.4732	91.9834	97.1014	61.6929	4888	426	4891	146	111	76.0274
egarrison-hhga	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	95.1176	93.9650	96.2988	73.4406	1448	93	1431	55	36	65.4545
egarrison-hhga	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	94.5419	90.7051	98.7175	44.4016	2830	290	2848	37	34	91.8919
egarrison-hhga	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	92.6472	93.4150	91.8919	71.8393	610	43	612	54	41	75.9259
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.5328	99.2846	99.7822	62.2610	27480	198	27491	60	36	60.0000
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4577	99.1576	99.7596	63.2532	17420	148	17430	42	21	50.0000
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.2963	100.0000	92.8571	80.2817	13	0	13	1	1	100.0000
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.6677	99.5048	99.8311	60.3522	10047	50	10048	17	14	82.3529
ckim-vqsr	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	97.5490	95.8600	99.2985	63.8541	5094	220	5096	36	30	83.3333
ckim-vqsr	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.9845	98.4426	99.5324	77.7099	1517	24	1490	7	2	28.5714
ckim-vqsr	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.7096	93.7179	99.8985	40.2466	2924	196	2953	3	3	100.0000
ckim-vqsr	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	98.0480	100.0000	96.1708	73.2150	653	0	653	26	25	96.1538
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.2939	98.0121	98.5773	60.5225	15728	319	15729	227	215	94.7137
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.5688	99.2675	97.8799	72.6755	5556	41	5540	120	110	91.6667
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.7063	95.9630	99.5141	33.0555	6537	275	6554	32	32	100.0000
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	98.9385	99.9175	97.9784	62.3961	3635	3	3635	75	73	97.3333
ckim-vqsr	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	0.0000	66.6667	0.0000	0.0000	2	1	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	0.0000	66.6667	0.0000	0.0000	2	1	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.2755	98.9912	99.5615	74.4850	63781	650	63794	281	255	90.7473
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.5967	99.5697	99.6236	75.3470	33093	143	33087	125	100	80.0000
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.1068	94.7612	99.5714	64.0076	8809	487	8828	38	38	100.0000
ckim-vqsr	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.6856	99.9087	99.4636	76.0319	21879	20	21879	118	117	99.1525
ckim-vqsr	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.2521	96.8864	99.6568	72.9143	15092	485	15100	52	45	86.5385
ckim-vqsr	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4572	99.2298	99.6856	78.8294	6055	47	6025	19	12	63.1579
ckim-vqsr	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.1910	92.7080	99.9459	61.2682	5505	433	5543	3	3	100.0000
ckim-vqsr	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5070	99.8586	99.1578	72.7530	3532	5	3532	30	30	100.0000
ckim-vqsr	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-vqsr	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
ckim-vqsr	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0

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