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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
12801-12850 / 86044 show all
gduggal-bwavardINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
73.9336
100.0000
58.6466
95.6607
10785519
34.5455
gduggal-bwavardINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
68.2353
100.0000
51.7857
95.9288
10585418
33.3333
gduggal-bwavardINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
95.2381
93.3121
002011
100.0000
gduggal-bwavardINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
80.9251
78.3877
83.6323
72.4014
50506139255017198199240
94.1033
gduggal-bwavardINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
86.2553
98.3091
76.8345
75.3229
326745623251198029224
94.1032
gduggal-bwavardINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.3873
0.0000
0.0000
369260000
gduggal-bwavardINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
89.6250
81.2640
99.9038
61.4872
177964103176601716
94.1176
gduggal-bwavardINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
65.1709
54.2531
81.5900
69.4864
84517126832318781704
90.7348
gduggal-bwavardINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
84.1187
95.1327
75.3903
72.1991
5805297574718761702
90.7249
gduggal-bwavardINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.5221
0.0000
0.0000
315907000
gduggal-bwavardINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
84.9850
73.9327
99.9224
57.1120
2615922257622
100.0000
gduggal-bwavardINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
55.2299
52.5133
58.2428
71.2539
18701691187613451229
91.3755
gduggal-bwavardINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
64.5844
94.0959
49.1648
73.3293
127580129513391224
91.4115
gduggal-bwavardINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.4637
0.0000
0.0000
61288000
gduggal-bwavardINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
78.1643
64.5833
98.9779
55.8315
58932358165
83.3333
gduggal-bwavardINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
43.5803
37.0727
52.8590
78.7470
423718416371276
74.3935
gduggal-bwavardINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
62.0275
82.7982
49.5879
79.0744
36175361367274
74.6594
gduggal-bwavardINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.6861
0.0000
0.0000
4579000
gduggal-bwavardINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
62.9688
47.5410
93.2203
73.6607
58645542
50.0000
eyeh-varpipeINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
58.5321
47.8735
75.2959
43.8204
25442770871428592841
99.3704
eyeh-varpipeINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
78.4487
74.1077
83.3299
46.2271
11423994044809800
98.8875
eyeh-varpipeINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
45.1634
29.5192
96.0848
46.1217
921219923569696
100.0000
eyeh-varpipeINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
62.4607
73.6600
54.2174
39.2369
481172231419541945
99.5394
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
70.9466
66.7041
75.7654
53.5142
1070453431086434753422
98.4748
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
90.2411
88.1901
92.3898
58.0809
49366614589378364
96.2963
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
51.7828
35.4521
96.0081
54.3492
241543972862119117
98.3193
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
67.6237
92.1660
53.4032
48.7367
3353285341329782941
98.7576
eyeh-varpipeINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
85.1064
100.0000
74.0741
95.3356
101404936
73.4694
eyeh-varpipeINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
93.6170
100.0000
88.0000
95.8882
104464
66.6667
eyeh-varpipeINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
80.0000
94.8520
00641613
81.2500
eyeh-varpipeINDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
54.2373
95.3978
00322719
70.3704
eyeh-varpipeINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
91.9743
90.3292
93.6805
71.4710
5820062316021540623944
97.0950
eyeh-varpipeINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
98.1071
97.0183
99.2207
69.5547
3224599132847258171
66.2791
eyeh-varpipeINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
61.3581
44.8472
97.1096
76.3054
416951275006149142
95.3020
eyeh-varpipeINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
92.2240
99.4840
85.9515
72.5594
217861132236236553631
99.3434
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
83.1973
74.7833
93.7446
68.3849
1164939286175841214009
97.2822
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
95.7997
94.0020
97.6675
65.5892
573636636639875794
90.7429
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
61.4597
44.8804
97.4636
72.8689
266532734957129121
93.7984
eyeh-varpipeINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
89.1434
91.8292
86.6102
71.1229
32482892016231173094
99.2621
eyeh-varpipeINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
56.7870
50.7723
64.4183
57.0048
180817531805997979
98.1946
eyeh-varpipeINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
69.8290
73.2103
66.7462
59.7115
992363839418413
98.8038
eyeh-varpipeINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
38.1941
23.9567
94.1423
64.6972
3109844502828
100.0000
eyeh-varpipeINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
51.6769
55.4825
48.3599
47.7729
506406516551538
97.6407
eyeh-varpipeINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
33.4409
22.7870
62.8044
47.2074
260881748443442
99.7743
eyeh-varpipeINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
37.7753
27.5229
60.2000
50.3476
120316301199199
100.0000
eyeh-varpipeINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
21.7822
12.3499
92.2018
54.2977
725112011717
100.0000
eyeh-varpipeINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
53.8085
55.7377
52.0085
38.7306
6854246227226
99.5595
dgrover-gatkSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.5765
99.8591
99.2956
64.7620
27639392762919619
9.6939
dgrover-gatkSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.3936
99.8748
98.9170
66.2587
17546221753619215
7.8125