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Explore HG002 comparison results
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EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
12601-12650 / 86044 show all
gduggal-snapfbSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_merged*
89.1402
99.2630
80.8911
72.6164
27474204275796515214
3.2847
gduggal-snapfbSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
85.6403
99.1633
75.3631
71.5296
17421147175405734127
2.2149
gduggal-snapfbSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
14.6893
100.0000
7.9268
78.0161
130131513
1.9868
gduggal-snapfbSNPtvlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
96.6878
99.4355
94.0878
74.6352
10040571002663084
13.3333
gduggal-snapfbINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
83.6015
87.3211
80.1860
72.6837
136021975122463026728
24.0582
gduggal-snapfbINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
81.4700
91.7896
73.2362
71.7064
560150164362352386
16.4116
gduggal-snapfbINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
84.8725
80.8690
89.2931
75.5803
480211362602312198
63.4615
gduggal-snapfbINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
90.1510
90.4439
89.8599
72.3577
31993383208362144
39.7790
gduggal-snapfbINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
94.5807
94.0681
95.0990
73.7052
6060938226153031711742
54.9354
gduggal-snapfbINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
95.2178
95.1859
95.2497
71.1485
316361600371351852568
30.6695
gduggal-snapfbINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
87.7974
81.4329
95.2411
80.6685
757017263002150102
68.0000
gduggal-snapfbINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
96.2548
97.7351
94.8187
76.1564
214034962139311691072
91.7023
gduggal-snapfbINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0876
0.0000
0.0000
11140000
gduggal-snapfbINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.2294
0.0000
0.0000
1435000
gduggal-snapfbINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
0583000
gduggal-snapfbINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
0122000
gduggal-snapfbSNP*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
88.4732
99.0329
79.9484
69.7226
550935385547713914538
3.8666
gduggal-snapfbSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
84.6436
98.9102
73.9737
69.3624
350333863540912458341
2.7372
gduggal-snapfbSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
14.6893
100.0000
7.9268
78.0161
130131513
1.9868
gduggal-snapfbSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
96.4947
99.2475
93.8904
70.4163
20047152200551305194
14.8659
gduggal-snapfbSNPtilowcmp_AllRepeats_lt51bp_gt95identity_merged*
87.6693
98.8054
78.7892
66.3228
27625334279047512326
4.3397
gduggal-snapfbSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
83.6868
98.6611
72.6589
66.9839
17612239178696724214
3.1826
gduggal-snapfbSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
9.6000
100.0000
5.0420
75.4132
6061132
1.7699
gduggal-snapfbSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
96.3021
99.0596
93.6939
64.5457
100079510029675110
16.2963
gduggal-snapfbINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
80.3731
72.7114
89.8397
50.0523
1166843791244114071388
98.6496
gduggal-snapfbINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
78.4631
67.4647
93.7460
41.7311
377618218829589574
97.4533
gduggal-snapfbINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
79.1493
72.0787
87.7579
53.3974
491019026388989
100.0000
gduggal-snapfbINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
81.1322
81.9681
80.3133
62.9774
29826562974729725
99.4513
gduggal-snapfbINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
67.2507
57.7531
80.4869
56.9596
306922452215537513
95.5307
gduggal-snapfbINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
69.0921
61.2589
79.2222
54.8419
9445971426374353
94.3850
gduggal-snapfbINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
68.1644
57.9487
82.7526
54.9804
180813124759996
96.9697
gduggal-snapfbINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
61.2790
48.5452
83.0688
66.6372
3173363146464
100.0000
gduggal-bwavardINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
33.3333
95.6485
0017344
11.7647
gduggal-bwavardINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
30.4348
95.4858
0014324
12.5000
gduggal-bwavardINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
60.0000
96.7320
00320
0.0000
gduggal-bwavardINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
68.0394
66.6667
69.4698
94.6639
2138016740
23.9521
gduggal-bwavardINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
64.3489
66.6667
62.1868
95.0669
2127316640
24.0964
gduggal-bwavardINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtilowcmp_AllRepeats_lt51bp_gt95identity_merged*
92.4984
86.7234
99.0973
67.6373
2424737122426222175
33.9367
gduggal-bwaplatSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
92.0320
86.1800
98.7365
71.8190
1538424671539519756
28.4264
gduggal-bwaplatSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
80.0000
66.6667
100.0000
87.8788
42400
gduggal-bwaplatSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
93.3264
87.6955
99.7299
56.2023
8859124388632419
79.1667
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
78.1296
65.4234
96.9610
81.1140
1019153861017831994
29.4671
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
72.9905
59.8984
93.4066
85.0088
36552447365525842
16.2791
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
83.3739
71.9097
99.1866
76.8457
4270166842683533
94.2857
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
77.7475
64.0656
98.8601
79.0638
2266127122552619
73.0769
gduggal-bwaplatSNP*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
89.7995
82.2060
98.9387
71.6625
45732989945775491144
29.3279
gduggal-bwaplatSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
89.3508
81.7668
98.4855
74.7866
28961645829002446106
23.7668
gduggal-bwaplatSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
86.9565
76.9231
100.0000
84.3750
1031000