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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 247 248 249 250 251 252 253 254 255 ... 1720 1721 » 12501-12550 / 86044 show all
astatham-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.8715	98.1383	99.6157	72.7478	15287	290	15293	59	49	83.0508
astatham-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4739	99.3445	99.6037	78.1364	6062	40	6032	24	14	58.3333
astatham-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.8685	95.8740	99.9477	63.1785	5693	245	5729	3	3	100.0000
astatham-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.4789	99.8586	99.1021	72.7252	3532	5	3532	32	32	100.0000
bgallagher-sentieon	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.6669	97.8687	99.4782	72.3688	15245	332	15252	80	64	80.0000
bgallagher-sentieon	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4743	99.4428	99.5058	77.9305	6068	34	6040	30	14	46.6667
bgallagher-sentieon	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.4365	95.0488	99.9472	61.8862	5644	294	5679	3	3	100.0000
bgallagher-sentieon	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.2834	99.8869	98.6872	72.6216	3533	4	3533	47	47	100.0000
bgallagher-sentieon	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.1344	98.2308	98.0381	71.7207	3498	63	3498	70	50	71.4286
bgallagher-sentieon	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	97.7313	99.3358	96.1778	82.5839	1346	9	1233	49	32	65.3061
bgallagher-sentieon	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.7023	95.9815	99.4860	36.7100	1242	52	1355	7	7	100.0000
bgallagher-sentieon	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.1285	99.7807	98.4848	70.2320	910	2	910	14	11	78.5714
bgallagher-sentieon	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
bgallagher-sentieon	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
bgallagher-sentieon	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	96.7166	95.4426	98.0251	79.9026	1089	52	1092	22	18	81.8182
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	97.0751	96.5596	97.5962	85.4240	421	15	406	10	6	60.0000
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.5572	93.6535	99.6466	65.5088	546	37	564	2	2	100.0000
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	96.0630	100.0000	92.4242	87.4046	122	0	122	10	10	100.0000
bgallagher-sentieon	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	0.0000	66.6667	0.0000	0.0000	2	1	0	0	0
bgallagher-sentieon	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	0.0000	66.6667	0.0000	0.0000	2	1	0	0	0
bgallagher-sentieon	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.2748	99.1091	99.4411	74.0482	63857	574	63870	359	327	91.0864
bgallagher-sentieon	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.6226	99.6991	99.5463	74.7408	33136	100	33130	151	120	79.4702
bgallagher-sentieon	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.2540	95.0409	99.5726	63.0163	8835	461	8854	38	38	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5837	99.9406	99.2292	75.9456	21886	13	21886	170	169	99.4118
bgallagher-sentieon	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.0710	97.8937	98.2489	60.0570	15709	338	15710	280	267	95.3571
bgallagher-sentieon	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.5086	99.3568	97.6748	72.1675	5561	36	5545	132	121	91.6667
bgallagher-sentieon	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.5221	95.5960	99.5274	32.5866	6512	300	6529	31	31	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	98.3899	99.9450	96.8825	62.1062	3636	2	3636	117	115	98.2906
astatham-gatk	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	0.0000	66.6667	0.0000	0.0000	2	1	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	0.0000	66.6667	0.0000	0.0000	2	1	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	96.4923	97.2577	95.7388	64.3143	26919	759	27590	1228	588	47.8827
anovak-vg	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	95.8647	96.7839	94.9628	65.9014	17003	565	17476	927	381	41.1003
anovak-vg	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	23.0769	0.0000	0.0000	3	10	0	0	0
anovak-vg	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	97.6409	98.1777	97.1099	61.1163	9913	184	10114	301	207	68.7708
anovak-vg	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	54.5816	47.5637	64.0290	69.1270	7409	8168	14395	8087	6755	83.5291
anovak-vg	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	47.9368	36.5290	69.7055	72.0207	2229	3873	9137	3971	2851	71.7955
anovak-vg	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	32.9741	0.0000	0.0000	1958	3980	0	0	0
anovak-vg	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	69.4306	91.0941	56.0913	63.9073	3222	315	5258	4116	3904	94.8494
anovak-vg	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	96.1202	97.0035	95.2529	60.1354	53964	1667	55240	2753	1338	48.6015
anovak-vg	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	95.3736	96.4849	94.2876	62.2229	34174	1245	35108	2127	869	40.8557

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