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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 21 22 23 24 25 26 27 28 29 ... 1720 1721 » 1201-1250 / 86044 show all
jlack-gatk	INDEL	C16_PLUS	*	*		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	*	het		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	*	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C16_PLUS	*	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C1_5	*	*	0.0000	90.0000	0.0000	0.0000	9	1	0	0	0
jlack-gatk	INDEL	C1_5	*	het	0.0000	88.8889	0.0000	0.0000	8	1	0	0	0
jlack-gatk	INDEL	C1_5	*	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
jlack-gatk	INDEL	C1_5	*	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	*	*	0.0000	100.0000	0.0000	0.0000	7	0	0	0	0
jlack-gatk	INDEL	C6_15	*	het	0.0000	100.0000	0.0000	0.0000	7	0	0	0	0
jlack-gatk	INDEL	C6_15	*	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	C6_15	*	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
jlack-gatk	INDEL	D16_PLUS	*	*	96.2606	96.5065	96.0159	70.3319	6547	237	6531	271	163	60.1476
jlack-gatk	INDEL	D16_PLUS	*	het	95.4976	98.6705	92.5225	78.1303	3117	42	2883	233	133	57.0815
jlack-gatk	INDEL	D16_PLUS	*	hetalt	94.8361	90.8432	99.1960	37.9289	1756	177	1974	16	15	93.7500
jlack-gatk	INDEL	D16_PLUS	*	homalt	98.8194	98.9362	98.7028	69.0115	1674	18	1674	22	15	68.1818
jlack-gatk	INDEL	D1_5	*	*	99.0320	99.1134	98.9507	60.1218	145444	1301	145502	1543	552	35.7745
jlack-gatk	INDEL	D1_5	*	het	99.1283	99.6506	98.6115	59.9642	87268	306	87281	1229	246	20.0163
jlack-gatk	INDEL	D1_5	*	hetalt	95.0041	90.9322	99.4577	62.5612	9316	929	9354	51	46	90.1961
jlack-gatk	INDEL	D1_5	*	homalt	99.6645	99.8651	99.4647	59.9060	48860	66	48867	263	260	98.8593
jlack-gatk	INDEL	D6_15	*	*	96.4774	96.4127	96.5422	54.8116	25156	936	25156	901	581	64.4839
jlack-gatk	INDEL	D6_15	*	het	96.7124	98.9476	94.5760	63.3561	11470	122	11421	655	345	52.6718
jlack-gatk	INDEL	D6_15	*	hetalt	94.6900	90.3964	99.4119	33.6937	7389	785	7438	44	37	84.0909
jlack-gatk	INDEL	D6_15	*	homalt	98.1988	99.5416	96.8918	51.5867	6297	29	6297	202	199	98.5149
jlack-gatk	INDEL	I16_PLUS	*	*	95.3468	94.3077	96.4091	70.3461	6014	363	6014	224	155	69.1964
jlack-gatk	INDEL	I16_PLUS	*	het	96.8584	96.8359	96.8808	75.4914	2632	86	2609	84	21	25.0000
jlack-gatk	INDEL	I16_PLUS	*	hetalt	92.9357	87.1306	99.5697	57.5280	1828	270	1851	8	7	87.5000
jlack-gatk	INDEL	I16_PLUS	*	homalt	95.7191	99.5516	92.1708	70.2698	1554	7	1554	132	127	96.2121
jlack-gatk	INDEL	I1_5	*	*	99.0273	98.9407	99.1140	59.6345	149068	1596	149119	1333	677	50.7877
jlack-gatk	INDEL	I1_5	*	het	99.1970	99.4952	98.9006	61.6913	78642	399	78625	874	231	26.4302
jlack-gatk	INDEL	I1_5	*	hetalt	94.8892	90.3796	99.8725	62.8887	10118	1077	10180	13	12	92.3077
jlack-gatk	INDEL	I1_5	*	homalt	99.5330	99.8014	99.2660	55.8866	60308	120	60314	446	434	97.3094
jlack-gatk	INDEL	I6_15	*	*	96.1308	95.2745	97.0025	53.1865	23650	1173	23656	731	625	85.4993
jlack-gatk	INDEL	I6_15	*	het	97.9846	98.0664	97.9029	60.0128	9839	194	9804	210	112	53.3333
jlack-gatk	INDEL	I6_15	*	hetalt	94.0319	88.8083	99.9084	39.1561	7594	957	7635	7	6	85.7143
jlack-gatk	INDEL	I6_15	*	homalt	95.8674	99.6474	92.3637	53.5505	6217	22	6217	514	507	98.6381
jlack-gatk	SNP	*	*	*	99.7200	99.9393	99.5016	23.6335	3052765	1854	3052612	15290	548	3.5840
jlack-gatk	SNP	*	*	het	99.5639	99.9321	99.1985	27.0831	1872315	1272	1872190	15127	441	2.9153
jlack-gatk	SNP	*	*	hetalt	99.0280	99.4259	98.6333	53.8866	866	5	866	12	11	91.6667
jlack-gatk	SNP	*	*	homalt	99.9692	99.9511	99.9872	17.3366	1179584	577	1179556	151	96	63.5762
jlack-gatk	SNP	ti	*	*	99.7777	99.9393	99.6165	21.7408	2084246	1265	2084182	8024	364	4.5364
jlack-gatk	SNP	ti	*	het	99.6581	99.9316	99.3861	24.9292	1281014	877	1280960	7913	288	3.6396
jlack-gatk	SNP	ti	*	hetalt	98.8034	99.3127	98.2993	52.8846	578	4	578	10	10	100.0000
jlack-gatk	SNP	ti	*	homalt	99.9698	99.9522	99.9874	15.9699	802654	384	802644	101	66	65.3465
jlack-gatk	SNP	tv	*	*	99.5956	99.9388	99.2547	27.4223	969097	593	969008	7276	194	2.6663
jlack-gatk	SNP	tv	*	het	99.3606	99.9332	98.7945	31.3268	591301	395	591230	7214	153	2.1209
jlack-gatk	SNP	tv	*	hetalt	99.0280	99.4259	98.6333	53.8866	866	5	866	12	11	91.6667
jlack-gatk	SNP	tv	*	homalt	99.9678	99.9488	99.9867	20.1040	376930	193	376912	50	30	60.0000
jli-custom	INDEL	*	*	*	99.3675	99.0788	99.6580	57.6935	341368	3174	341213	1171	951	81.2126
jli-custom	INDEL	*	*	het	99.5119	99.3015	99.7232	58.0133	192777	1356	192389	534	340	63.6704

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