PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 237 238 239 240 241 242 243 244 245 ... 1720 1721 » 12001-12050 / 86044 show all
gduggal-snapvard	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	63.1579	60.0000	66.6667	99.7768	12	8	12	6	5	83.3333
ghariani-varprowl	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	75.8621	91.6667	64.7059	99.5499	11	1	11	6	5	83.3333
ghariani-varprowl	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
ghariani-varprowl	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	33.3333	20.0000	100.0000	99.8936	1	4	1	0	0
gduggal-snapvard	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	C6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ghariani-varprowl	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	28.5714	25.0000	33.3333	98.7705	1	3	1	2	2	100.0000
ghariani-varprowl	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	50.0000	100.0000	33.3333	98.6047	1	0	1	2	2	100.0000
ghariani-varprowl	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
ghariani-varprowl	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapplat	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	1	0	0	0
gduggal-snapplat	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	1	0	0	0
gduggal-snapplat	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapplat	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge