PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 218 219 220 221 222 223 224 225 226 ... 1720 1721 » 11051-11100 / 86044 show all
eyeh-varpipe	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	100.0000	87.5000	0	0	1	0	0
eyeh-varpipe	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	66.6667	50.0000	100.0000	99.5012	2	2	2	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	99.3976	1	0	2	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	2	0	0	0
cchapple-custom	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	96.5278	6	0	5	0	0
cchapple-custom	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	96.3303	3	0	4	0	0
cchapple-custom	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	2	0	0	0	0
cchapple-custom	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	97.1429	1	0	1	0	0
cchapple-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
cchapple-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
cchapple-custom	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	98.9729	11	0	11	0	0
cchapple-custom	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.8432	8	0	9	0	0
cchapple-custom	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.3174	2	0	2	0	0
cchapple-custom	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		100.0000		100.0000	1	0	0	0	0
cchapple-custom	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
cchapple-custom	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
cchapple-custom	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
cchapple-custom	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
cchapple-custom	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ciseli-custom	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ciseli-custom	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ciseli-custom	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ciseli-custom	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ciseli-custom	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ciseli-custom	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ciseli-custom	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ciseli-custom	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	1	0	0	0
ciseli-custom	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ciseli-custom	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
ciseli-custom	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge